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SUPT20H SPT20 homolog, SAGA complex component [ Camelus ferus (Wild Bactrian camel) ]

Gene ID: 102515776, updated on 10-Mar-2024

Summary

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Gene symbol
SUPT20H
Gene description
SPT20 homolog, SAGA complex component
See related
EnsemblRapid:ENSCFEG00005012488
Gene type
protein coding
RefSeq status
MODEL
Organism
Camelus ferus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Tylopoda; Camelidae; Camelus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 14
Exon count:
28
Annotation release Status Assembly Chr Location
102 current BCGSAC_Cfer_1.0 (GCF_009834535.1) 14 NC_045709.1 (14007066..14040359)
101 previous assembly CB1 (GCF_000311805.1) Unplaced Scaffold NW_006210798.1 (2175537..2208197)

Chromosome 14 - NC_045709.1Genomic Context describing neighboring genes Neighboring gene translation initiation factor IF-2-like Neighboring gene U4 spliceosomal RNA Neighboring gene periostin Neighboring gene transfer RNA isoleucine (anticodon AAU) Neighboring gene exosome component 8 Neighboring gene serine/arginine repetitive matrix protein 1-like Neighboring gene ALG5 dolichyl-phosphate beta-glucosyltransferase Neighboring gene U6 spliceosomal RNA Neighboring gene SMAD family member 9

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables transcription coregulator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of SAGA complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transcription factor SPT20 homolog
Names
suppressor of Ty 20 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Camelus ferus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference BCGSAC_Cfer_1.0 Primary Assembly

Genomic

  1. NC_045709.1 Reference BCGSAC_Cfer_1.0 Primary Assembly

    Range
    14007066..14040359
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_032496271.1 → XP_032352162.1  transcription factor SPT20 homolog isoform X1

    UniProtKB/TrEMBL
    A0A8B8UCU7
    Conserved Domains (1) summary
    pfam12090
    Location:64 → 203
    Spt20; Spt20 family

  2. XM_032496278.1 → XP_032352169.1  transcription factor SPT20 homolog isoform X5

    UniProtKB/TrEMBL
    A0A8B8UC48
    Conserved Domains (1) summary
    pfam12090
    Location:64 → 203
    Spt20; Spt20 family

  3. XM_032496279.1 → XP_032352170.1  transcription factor SPT20 homolog isoform X6

    UniProtKB/TrEMBL
    A0A8B8UDG9
    Related
    ENSCFEP00005020733.1, ENSCFET00005023095.1
    Conserved Domains (1) summary
    pfam12090
    Location:64 → 203
    Spt20; Spt20 family

  4. XM_032496280.1 → XP_032352171.1  transcription factor SPT20 homolog isoform X7

    UniProtKB/TrEMBL
    A0A8B8UC52
    Conserved Domains (1) summary
    pfam12090
    Location:64 → 203
    Spt20; Spt20 family

  5. XM_032496275.1 → XP_032352166.1  transcription factor SPT20 homolog isoform X3

    UniProtKB/TrEMBL
    A0A8B8UC49
    Conserved Domains (1) summary
    pfam12090
    Location:64 → 203
    Spt20; Spt20 family

  6. XM_032496277.1 → XP_032352168.1  transcription factor SPT20 homolog isoform X4

    UniProtKB/TrEMBL
    A0A8B8UCV2
    Conserved Domains (1) summary
    pfam12090
    Location:64 → 203
    Spt20; Spt20 family

  7. XM_032496274.1 → XP_032352165.1  transcription factor SPT20 homolog isoform X2

    UniProtKB/TrEMBL
    A0A8B8UDG4
    Conserved Domains (1) summary
    pfam12090
    Location:63 → 202
    Spt20; Spt20 family

  8. XM_032496281.1 → XP_032352172.1  transcription factor SPT20 homolog isoform X8

    UniProtKB/TrEMBL
    A0A8B8UCY7
    Related
    ENSCFEP00005021045.1, ENSCFET00005023444.1
    Conserved Domains (1) summary
    pfam12090
    Location:76 → 215
    Spt20; Spt20 family

  9. XM_032496272.1 → XP_032352163.1  transcription factor SPT20 homolog isoform X1

    UniProtKB/TrEMBL
    A0A8B8UCU7
    Conserved Domains (1) summary
    pfam12090
    Location:64 → 203
    Spt20; Spt20 family

  10. XM_032496276.1 → XP_032352167.1  transcription factor SPT20 homolog isoform X2

    UniProtKB/TrEMBL
    A0A8B8UDG4
    Conserved Domains (1) summary
    pfam12090
    Location:63 → 202
    Spt20; Spt20 family

  11. XM_032496273.1 → XP_032352164.1  transcription factor SPT20 homolog isoform X1

    UniProtKB/TrEMBL
    A0A8B8UCU7
    Conserved Domains (1) summary
    pfam12090
    Location:64 → 203
    Spt20; Spt20 family

  12. XM_014557556.2 → XP_014413042.2  transcription factor SPT20 homolog isoform X1

    UniProtKB/TrEMBL
    A0A8B8UCU7
    Conserved Domains (1) summary
    pfam12090
    Location:64 → 203
    Spt20; Spt20 family

  13. XM_014557559.2 → XP_014413045.2  transcription factor SPT20 homolog isoform X1

    UniProtKB/TrEMBL
    A0A8B8UCU7
    Conserved Domains (1) summary
    pfam12090
    Location:64 → 203
    Spt20; Spt20 family

  14. XM_014557557.2 → XP_014413043.2  transcription factor SPT20 homolog isoform X1

    UniProtKB/TrEMBL
    A0A8B8UCU7
    Conserved Domains (1) summary
    pfam12090
    Location:64 → 203
    Spt20; Spt20 family
Nucleotide Protein
Heading Accession and Version

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