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SNF8 SNF8 subunit of ESCRT-II [ Camelus ferus (Wild Bactrian camel) ]

Gene ID: 102512652, updated on 10-Mar-2024

Summary

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Gene symbol
SNF8
Gene description
SNF8 subunit of ESCRT-II
Locus tag
CB1_000261069
See related
EnsemblRapid:ENSCFEG00005022953
Gene type
protein coding
RefSeq status
MODEL
Organism
Camelus ferus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Tylopoda; Camelidae; Camelus
Orthologs
human mouse all
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Genomic context

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See SNF8 in Genome Data Viewer
Location:
chromosome: 16
Exon count:
8
Annotation release Status Assembly Chr Location
102 current BCGSAC_Cfer_1.0 (GCF_009834535.1) 16 NC_045711.1 (46451897..46459673)
101 previous assembly CB1 (GCF_000311805.1) Unplaced Scaffold NW_006210437.1 (2497038..2504768, complement)

Chromosome 16 - NC_045711.1Genomic Context describing neighboring genes Neighboring gene insulin like growth factor 2 mRNA binding protein 1 Neighboring gene gastric inhibitory polypeptide Neighboring gene ubiquitin conjugating enzyme E2 Z Neighboring gene small nucleolar RNA U89 Neighboring gene ATP synthase membrane subunit c locus 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequences of wild and domestic bactrian camels. Bactrian Camels Genome Sequencing and Analysis Consortium, et al. Nat Commun, 2012. PMID 23149746, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in protein transport to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of ESCRT II complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
vacuolar-sorting protein SNF8
Names
SNF8, ESCRT-II complex subunit

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Camelus ferus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference BCGSAC_Cfer_1.0 Primary Assembly

Genomic

  1. NC_045711.1 Reference BCGSAC_Cfer_1.0 Primary Assembly

    Range
    46451897..46459673
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006176412.3 → XP_006176474.1  vacuolar-sorting protein SNF8

    See identical proteins and their annotated locations for XP_006176474.1

    UniProtKB/TrEMBL
    S9YT70
    Related
    ENSCFEP00005038734.1, ENSCFET00005042931.1
    Conserved Domains (1) summary
    pfam04157
    Location:6 → 225
    EAP30; EAP30/Vps36 family
Nucleotide Protein
Heading Accession and Version

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