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APBA2 amyloid beta precursor protein binding family A member 2 [ Camelus ferus (Wild Bactrian camel) ]

Gene ID: 102505121, updated on 10-Mar-2024

Summary

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Gene symbol
APBA2
Gene description
amyloid beta precursor protein binding family A member 2
Locus tag
CB1_000803011
See related
EnsemblRapid:ENSCFEG00005019034
Gene type
protein coding
RefSeq status
MODEL
Organism
Camelus ferus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Tylopoda; Camelidae; Camelus
Orthologs
human mouse all
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Genomic context

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See APBA2 in Genome Data Viewer
Location:
chromosome: 27
Exon count:
16
Annotation release Status Assembly Chr Location
102 current BCGSAC_Cfer_1.0 (GCF_009834535.1) 27 NC_045722.1 (23077390..23253908, complement)
101 previous assembly CB1 (GCF_000311805.1) Unplaced Scaffold NW_006210979.1 (811950..836231, complement)

Chromosome 27 - NC_045722.1Genomic Context describing neighboring genes Neighboring gene endosomal transmembrane epsin interactor 2 Neighboring gene U6 spliceosomal RNA Neighboring gene NSE3 homolog, SMC5-SMC6 complex component Neighboring gene M-phase phosphoprotein 10 Neighboring gene methylmalonyl-CoA epimerase

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequences of wild and domestic bactrian camels. Bactrian Camels Genome Sequencing and Analysis Consortium, et al. Nat Commun, 2012. PMID 23149746, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables amyloid-beta binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chemical synaptic transmission IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in dendritic spine IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
amyloid-beta A4 precursor protein-binding family A member 2
Names
amyloid beta A4 precursor protein-binding family A member 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Camelus ferus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference BCGSAC_Cfer_1.0 Primary Assembly

Genomic

  1. NC_045722.1 Reference BCGSAC_Cfer_1.0 Primary Assembly

    Range
    23077390..23253908 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_032469206.1 → XP_032325097.1  amyloid-beta A4 precursor protein-binding family A member 2 isoform X1

    UniProtKB/TrEMBL
    A0A8B8S4E3
    Related
    ENSCFEP00005031964.1, ENSCFET00005035449.1
    Conserved Domains (4) summary
    PHA03307
    Location:10 → 311
    PHA03307; transcriptional regulator ICP4; Provisional
    cd00992
    Location:657 → 730
    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
    cd01208
    Location:363 → 535
    PTB_X11; X11-like Phosphotyrosine-binding (PTB) domain
    pfam00595
    Location:568 → 651
    PDZ; PDZ domain (Also known as DHR or GLGF)

  2. XM_032469207.1 → XP_032325098.1  amyloid-beta A4 precursor protein-binding family A member 2 isoform X1

    UniProtKB/TrEMBL
    A0A8B8S4E3
    Conserved Domains (4) summary
    PHA03307
    Location:10 → 311
    PHA03307; transcriptional regulator ICP4; Provisional
    cd00992
    Location:657 → 730
    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
    cd01208
    Location:363 → 535
    PTB_X11; X11-like Phosphotyrosine-binding (PTB) domain
    pfam00595
    Location:568 → 651
    PDZ; PDZ domain (Also known as DHR or GLGF)

  3. XM_032469205.1 → XP_032325096.1  amyloid-beta A4 precursor protein-binding family A member 2 isoform X1

    UniProtKB/TrEMBL
    A0A8B8S4E3
    Conserved Domains (4) summary
    PHA03307
    Location:10 → 311
    PHA03307; transcriptional regulator ICP4; Provisional
    cd00992
    Location:657 → 730
    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
    cd01208
    Location:363 → 535
    PTB_X11; X11-like Phosphotyrosine-binding (PTB) domain
    pfam00595
    Location:568 → 651
    PDZ; PDZ domain (Also known as DHR or GLGF)

  4. XM_032469208.1 → XP_032325099.1  amyloid-beta A4 precursor protein-binding family A member 2 isoform X2

    UniProtKB/TrEMBL
    A0A8B8S5Z2
    Related
    ENSCFEP00005031999.1, ENSCFET00005035494.1
    Conserved Domains (4) summary
    PHA03307
    Location:10 → 311
    PHA03307; transcriptional regulator ICP4; Provisional
    cd00992
    Location:645 → 718
    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
    cd01208
    Location:363 → 523
    PTB_X11; X11-like Phosphotyrosine-binding (PTB) domain
    pfam00595
    Location:556 → 639
    PDZ; PDZ domain (Also known as DHR or GLGF)
Nucleotide Protein
Heading Accession and Version

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