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CLDN11 claudin 11 [ Tupaia chinensis (Chinese tree shrew) ]

Gene ID: 102472509, updated on 10-Mar-2024

Summary

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Gene symbol
CLDN11
Gene description
claudin 11
Locus tag
TREES_T100017341
Gene type
protein coding
RefSeq status
MODEL
Organism
Tupaia chinensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Scandentia; Tupaiidae; Tupaia
Also known as
Claudin-11
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
3
Annotation release Status Assembly Chr Location
102 current TupChi_1.0 (GCF_000334495.1) Unplaced Scaffold NW_006203177.1 (344676..359769)

NW_006203177.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106733314 Neighboring gene SKI like proto-oncogene Neighboring gene solute carrier family 7 member 14 Neighboring gene ferritin heavy chain pseudogene

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006203177 Unplaced Scaffold Reference TupChi_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sodium taurocholate cotransporting polypeptide is a functional receptor for human hepatitis B and D virus. Yan H, et al. Elife, 2012 Nov 13. PMID 23150796, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables structural molecule activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in bicellular tight junction assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in bicellular tight junction IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
claudin-11

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Tupaia chinensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference TupChi_1.0

Genomic

  1. NW_006203177.1 Reference TupChi_1.0

    Range
    344676..359769
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006163857.2 → XP_006163919.1  claudin-11

    See identical proteins and their annotated locations for XP_006163919.1

    UniProtKB/TrEMBL
    L8YD40
    Conserved Domains (1) summary
    cl21598
    Location:6 → 172
    PMP22_Claudin; PMP-22/EMP/MP20/Claudin family
Nucleotide Protein
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