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OGFOD2 2-oxoglutarate and iron dependent oxygenase domain containing 2 [ Pelodiscus sinensis (Chinese soft-shelled turtle) ]

Gene ID: 102461198, updated on 10-Mar-2024

Summary

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Gene symbol
OGFOD2
Gene description
2-oxoglutarate and iron dependent oxygenase domain containing 2
See related
Ensembl:ENSPSIG00000015093
Gene type
protein coding
RefSeq status
MODEL
Organism
Pelodiscus sinensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Trionychia; Trionychidae; Pelodiscus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
102 current PelSin_1.0 (GCF_000230535.1) Unplaced Scaffold NW_005852499.1 (706562..719208, complement)

NW_005852499.1Genomic Context describing neighboring genes Neighboring gene phosphatidylinositol transfer protein membrane associated 2 Neighboring gene ADP ribosylation factor like GTPase 6 interacting protein 4 Neighboring gene uncharacterized LOC112544233 Neighboring gene ATP binding cassette subfamily B member 9

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005852499 Unplaced Scaffold Reference PelSin_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables L-ascorbic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables iron ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
2-oxoglutarate and iron-dependent oxygenase domain-containing protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pelodiscus sinensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PelSin_1.0 Primary Assembly

Genomic

  1. NW_005852499.1 Reference PelSin_1.0 Primary Assembly

    Range
    706562..719208 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014568846.2 → XP_014424332.1  2-oxoglutarate and iron-dependent oxygenase domain-containing protein 2 isoform X2

    UniProtKB/TrEMBL
    K7G9M8
    Related
    ENSPSIP00000016989.1, ENSPSIT00000017067.1
    Conserved Domains (1) summary
    smart00702
    Location:66 → 228
    P4Hc; Prolyl 4-hydroxylase alpha subunit homologues

  2. XM_025180048.1 → XP_025035833.1  2-oxoglutarate and iron-dependent oxygenase domain-containing protein 2 isoform X1

    UniProtKB/TrEMBL
    K7G9M8
    Conserved Domains (1) summary
    smart00702
    Location:146 → 308
    P4Hc; Prolyl 4-hydroxylase alpha subunit homologues

  3. XM_014568845.2 → XP_014424331.1  2-oxoglutarate and iron-dependent oxygenase domain-containing protein 2 isoform X2

    UniProtKB/TrEMBL
    K7G9M8
    Conserved Domains (1) summary
    smart00702
    Location:66 → 228
    P4Hc; Prolyl 4-hydroxylase alpha subunit homologues
Nucleotide Protein
Heading Accession and Version

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