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DCLRE1C DNA cross-link repair 1C [ Pelodiscus sinensis (Chinese soft-shelled turtle) ]

Gene ID: 102454446, updated on 10-Mar-2024

Summary

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Gene symbol
DCLRE1C
Gene description
DNA cross-link repair 1C
See related
Ensembl:ENSPSIG00000016323
Gene type
protein coding
RefSeq status
MODEL
Organism
Pelodiscus sinensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Trionychia; Trionychidae; Pelodiscus
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
14
Annotation release Status Assembly Chr Location
102 current PelSin_1.0 (GCF_000230535.1) Unplaced Scaffold NW_005853523.1 (2473876..2503826, complement)

NW_005853523.1Genomic Context describing neighboring genes Neighboring gene heat shock protein family A (Hsp70) member 14 Neighboring gene SUV39H2 histone lysine methyltransferase Neighboring gene U1 spliceosomal RNA Neighboring gene meiosis/spermiogenesis associated 1 Neighboring gene transmembrane protein 243

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005853523 Unplaced Scaffold Reference PelSin_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 5'-3' DNA exonuclease activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables damaged DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in double-strand break repair via nonhomologous end joining IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in interstrand cross-link repair IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protection from non-homologous end joining at telomere IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: protein artemis

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pelodiscus sinensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PelSin_1.0 Primary Assembly

Genomic

  1. NW_005853523.1 Reference PelSin_1.0 Primary Assembly

    Range
    2473876..2503826 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014570507.1 → XP_014425993.1  LOW QUALITY PROTEIN: protein artemis

    UniProtKB/TrEMBL
    K7GDV8
    Related
    ENSPSIP00000018469.1, ENSPSIT00000018555.1
    Conserved Domains (2) summary
    pfam07522
    Location:214 → 308
    DRMBL; DNA repair metallo-beta-lactamase
    cl23716
    Location:1 → 146
    metallo-hydrolase-like_MBL-fold; mainly hydrolytic enzymes and related proteins which carry out various biological functions; MBL-fold metallohydrolase domain
Nucleotide Protein
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