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DCAF12 DDB1 and CUL4 associated factor 12 [ Pelodiscus sinensis (Chinese soft-shelled turtle) ]

Gene ID: 102449765, updated on 10-Mar-2024

Summary

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Gene symbol
DCAF12
Gene description
DDB1 and CUL4 associated factor 12
See related
Ensembl:ENSPSIG00000012584
Gene type
protein coding
RefSeq status
MODEL
Organism
Pelodiscus sinensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Trionychia; Trionychidae; Pelodiscus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
102 current PelSin_1.0 (GCF_000230535.1) Unplaced Scaffold NW_005855215.1 (1789894..1849378)

NW_005855215.1Genomic Context describing neighboring genes Neighboring gene kinesin family member 24 Neighboring gene ubiquitin associated protein 1 Neighboring gene uncharacterized LOC112545780 Neighboring gene ubiquitin associated protein 2 Neighboring gene small nucleolar RNA SNORD121A

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005855215 Unplaced Scaffold Reference PelSin_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Cul4-RING E3 ubiquitin ligase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
DDB1- and CUL4-associated factor 12

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pelodiscus sinensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PelSin_1.0 Primary Assembly

Genomic

  1. NW_005855215.1 Reference PelSin_1.0 Primary Assembly

    Range
    1789894..1849378
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025184603.1 → XP_025040388.1  DDB1- and CUL4-associated factor 12 isoform X2

    UniProtKB/TrEMBL
    K7G1E1
    Related
    ENSPSIP00000014102.1, ENSPSIT00000014167.1
    Conserved Domains (2) summary
    COG2319
    Location:92 → 371
    WD40; WD40 repeat [General function prediction only]
    sd00039
    Location:79 → 119
    7WD40; WD40 repeat [structural motif]

  2. XM_006122989.3 → XP_006123051.2  DDB1- and CUL4-associated factor 12 isoform X1

    UniProtKB/TrEMBL
    K7G1D4, K7G1E1
    Related
    ENSPSIP00000014095.1, ENSPSIT00000014160.1
    Conserved Domains (3) summary
    COG2319
    Location:98 → 377
    WD40; WD40 repeat [General function prediction only]
    sd00039
    Location:85 → 125
    7WD40; WD40 repeat [structural motif]
    cl02567
    Location:80 → 274
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
Nucleotide Protein
Heading Accession and Version

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