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GNPDA2 glucosamine-6-phosphate deaminase 2 [ Bubalus bubalis (water buffalo) ]

Gene ID: 102411938, updated on 10-Mar-2024

Summary

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Gene symbol
GNPDA2
Gene description
glucosamine-6-phosphate deaminase 2
See related
EnsemblRapid:ENSBALG00030014557
Gene type
protein coding
RefSeq status
MODEL
Organism
Bubalus bubalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bubalus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 7
Exon count:
9
Annotation release Status Assembly Chr Location
103 current NDDB_SH_1 (GCF_019923935.1) 7 NC_059163.1 (53973359..54003684)
102 previous assembly NDDB_DH_1 (GCF_019923925.1) 7 NC_058349.1 (54273614..54303932)

Chromosome 7 - NC_059163.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC123334428 Neighboring gene transfer RNA cysteine (anticodon ACA) Neighboring gene GTP binding elongation factor GUF1 Neighboring gene Yip1 domain family member 7 Neighboring gene uncharacterized LOC102413900 Neighboring gene potassium channel tetramerization domain containing 8

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glucosamine-6-phosphate deaminase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables identical protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in N-acetylglucosamine catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in N-acetylneuraminate catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in glucosamine catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glucosamine-6-phosphate isomerase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bubalus bubalis Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NDDB_SH_1 Primary Assembly

Genomic

  1. NC_059163.1 Reference NDDB_SH_1 Primary Assembly

    Range
    53973359..54003684
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006078743.4 → XP_006078805.2  glucosamine-6-phosphate isomerase 2

    Conserved Domains (1) summary
    PRK00443
    Location:1 → 258
    nagB; glucosamine-6-phosphate deaminase; Provisional

  2. XM_044945920.2 → XP_044801855.1  glucosamine-6-phosphate isomerase 2

    Conserved Domains (1) summary
    PRK00443
    Location:1 → 258
    nagB; glucosamine-6-phosphate deaminase; Provisional

  3. XM_025290104.3 → XP_025145889.1  glucosamine-6-phosphate isomerase 2

    Related
    ENSBALP00030026853.1, ENSBALT00030040598.1
    Conserved Domains (1) summary
    PRK00443
    Location:1 → 258
    nagB; glucosamine-6-phosphate deaminase; Provisional
Nucleotide Protein
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