U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

CITED1 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 1 [ Bubalus bubalis (water buffalo) ]

Gene ID: 102395158, updated on 10-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
CITED1
Gene description
Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 1
See related
EnsemblRapid:ENSBALG00030022977
Gene type
protein coding
RefSeq status
MODEL
Organism
Bubalus bubalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bubalus
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: X
Exon count:
7
Annotation release Status Assembly Chr Location
103 current NDDB_SH_1 (GCF_019923935.1) X NC_059181.1 (64392525..64397892, complement)
102 previous assembly NDDB_DH_1 (GCF_019923925.1) X NC_058367.1 (66229260..66234627, complement)

Chromosome X - NC_059181.1Genomic Context describing neighboring genes Neighboring gene ERCC excision repair 6 like, spindle assembly checkpoint helicase Neighboring gene ribosomal protein S4 X-linked Neighboring gene uncharacterized LOC123331978 Neighboring gene histone deacetylase 8 Neighboring gene U6 spliceosomal RNA Neighboring gene transfer RNA tryptophan (anticodon CCA)

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. De Novo Transcriptome Assembly of the Chinese Swamp Buffalo by RNA Sequencing and SSR Marker Discovery. Deng T, et al. PLoS One, 2016. PMID 26766209, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in melanocyte differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
cbp/p300-interacting transactivator 1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Bubalus bubalis Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NDDB_SH_1 Primary Assembly

Genomic

  1. NC_059181.1 Reference NDDB_SH_1 Primary Assembly

    Range
    64392525..64397892 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006070022.3 → XP_006070084.1  cbp/p300-interacting transactivator 1 isoform X2

    See identical proteins and their annotated locations for XP_006070084.1

    Conserved Domains (1) summary
    pfam04487
    Location:89 → 191
    CITED

  2. XM_006070023.3 → XP_006070085.1  cbp/p300-interacting transactivator 1 isoform X2

    See identical proteins and their annotated locations for XP_006070085.1

    Conserved Domains (1) summary
    pfam04487
    Location:89 → 191
    CITED

  3. XM_006070025.3 → XP_006070087.1  cbp/p300-interacting transactivator 1 isoform X2

    See identical proteins and their annotated locations for XP_006070087.1

    Conserved Domains (1) summary
    pfam04487
    Location:89 → 191
    CITED

  4. XM_044937268.1 → XP_044793203.1  cbp/p300-interacting transactivator 1 isoform X1

    Conserved Domains (1) summary
    pfam04487
    Location:150 → 252
    CITED

  5. XM_006070020.3 → XP_006070082.1  cbp/p300-interacting transactivator 1 isoform X1

    See identical proteins and their annotated locations for XP_006070082.1

    Conserved Domains (1) summary
    pfam04487
    Location:150 → 252
    CITED

  6. XM_006070026.3 → XP_006070088.1  cbp/p300-interacting transactivator 1 isoform X2

    See identical proteins and their annotated locations for XP_006070088.1

    Related
    ENSBALP00030043796.1, ENSBALT00030064597.1
    Conserved Domains (1) summary
    pfam04487
    Location:89 → 191
    CITED

  7. XM_025276272.2 → XP_025132057.1  cbp/p300-interacting transactivator 1 isoform X2

    Conserved Domains (1) summary
    pfam04487
    Location:89 → 191
    CITED

  8. XM_025276271.2 → XP_025132056.1  cbp/p300-interacting transactivator 1 isoform X1

    Related
    ENSBALP00030043841.1, ENSBALT00030064652.1
    Conserved Domains (1) summary
    pfam04487
    Location:150 → 252
    CITED

  9. XM_006070024.4 → XP_006070086.1  cbp/p300-interacting transactivator 1 isoform X2

    See identical proteins and their annotated locations for XP_006070086.1

    Conserved Domains (1) summary
    pfam04487
    Location:89 → 191
    CITED
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.