U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

USP46 ubiquitin specific peptidase 46 [ Bubalus bubalis (water buffalo) ]

Gene ID: 102394140, updated on 10-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
USP46
Gene description
ubiquitin specific peptidase 46
See related
EnsemblRapid:ENSBALG00030004891
Gene type
protein coding
RefSeq status
MODEL
Organism
Bubalus bubalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bubalus
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 7
Exon count:
12
Annotation release Status Assembly Chr Location
103 current NDDB_SH_1 (GCF_019923935.1) 7 NC_059163.1 (49004922..49079613)
102 previous assembly NDDB_DH_1 (GCF_019923925.1) 7 NC_058349.1 (49281711..49356325)

Chromosome 7 - NC_059163.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC102393808 Neighboring gene small nucleolar RNA SNORA26 Neighboring gene uncharacterized LOC123334424 Neighboring gene uncharacterized LOC123334423 Neighboring gene transfer RNA cysteine (anticodon GCA) Neighboring gene poly(A) polymerase alpha-like

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cysteine-type deubiquitinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables cysteine-type endopeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein deubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
ubiquitin carboxyl-terminal hydrolase 46

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Bubalus bubalis Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NDDB_SH_1 Primary Assembly

Genomic

  1. NC_059163.1 Reference NDDB_SH_1 Primary Assembly

    Range
    49004922..49079613
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006057485.4 → XP_006057547.1  ubiquitin carboxyl-terminal hydrolase 46 isoform X2

    See identical proteins and their annotated locations for XP_006057547.1

    Related
    ENSBALP00030009120.1, ENSBALT00030013685.1
    Conserved Domains (1) summary
    cd02663
    Location:36 → 363
    Peptidase_C19G; A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl ...

  2. XM_044945874.2 → XP_044801809.1  ubiquitin carboxyl-terminal hydrolase 46 isoform X1

    Related
    ENSBALP00030009102.1, ENSBALT00030013658.1
    Conserved Domains (1) summary
    cd02663
    Location:75 → 402
    Peptidase_C19G; A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl ...

  3. XM_025290048.3 → XP_025145833.1  ubiquitin carboxyl-terminal hydrolase 46 isoform X4

    Related
    ENSBALP00030009110.1, ENSBALT00030013669.1
    Conserved Domains (1) summary
    cd02663
    Location:29 → 356
    Peptidase_C19G; A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl ...

  4. XM_025290047.3 → XP_025145832.1  ubiquitin carboxyl-terminal hydrolase 46 isoform X3

    Related
    ENSBALP00030009085.1, ENSBALT00030013636.1
    Conserved Domains (1) summary
    cd02663
    Location:31 → 358
    Peptidase_C19G; A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl ...
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.