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CNN2 calponin 2 [ Alligator sinensis (Chinese alligator) ]

Gene ID: 102387154, updated on 10-Mar-2024

Summary

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Gene symbol
CNN2
Gene description
calponin 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Alligator sinensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Crocodylia; Alligatoridae; Alligatorinae; Alligator
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
102 current ASM45574v1 (GCF_000455745.1) Unplaced Scaffold NW_005841880.1 (1362008..1374281)

NW_005841880.1Genomic Context describing neighboring genes Neighboring gene RNA polymerase II, I and III subunit E Neighboring gene Rho GTPase activating protein 45 Neighboring gene ATP binding cassette subfamily A member 7 Neighboring gene U6 spliceosomal RNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005841880 Unplaced Scaffold Reference ASM45574v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables actin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in actomyosin structure organization IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
calponin-2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Alligator sinensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM45574v1 Primary Assembly

Genomic

  1. NW_005841880.1 Reference ASM45574v1 Primary Assembly

    Range
    1362008..1374281
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006017562.2 → XP_006017624.1  calponin-2

    UniProtKB/TrEMBL
    A0A1U7RNR4
    Conserved Domains (3) summary
    COG5199
    Location:7 → 172
    SCP1; Calponin [Cytoskeleton]
    pfam00307
    Location:13 → 109
    CH; Calponin homology (CH) domain
    pfam00402
    Location:148 → 171
    Calponin; Calponin family repeat
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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