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KCNAB1 potassium voltage-gated channel subfamily A regulatory beta subunit 1 [ Alligator sinensis (Chinese alligator) ]

Gene ID: 102382526, updated on 11-Apr-2024

Summary

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Gene symbol
KCNAB1
Gene description
potassium voltage-gated channel subfamily A regulatory beta subunit 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Alligator sinensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Crocodylia; Alligatoridae; Alligatorinae; Alligator
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
15
Annotation release Status Assembly Chr Location
102 current ASM45574v1 (GCF_000455745.1) Unplaced Scaffold NW_005841858.1 (2251991..2568370)

NW_005841858.1Genomic Context describing neighboring genes Neighboring gene solute carrier family 33 member 1 Neighboring gene guanine monophosphate synthase Neighboring gene signal sequence receptor subunit 3 Neighboring gene TCDD inducible poly(ADP-ribose) polymerase

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005841858 Unplaced Scaffold Reference ASM45574v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables aldo-keto reductase (NADPH) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables potassium channel regulator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transmembrane transporter binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables voltage-gated potassium channel activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of delayed rectifier potassium channel activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in potassium ion transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extrinsic component of cytoplasmic side of plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in juxtaparanode region of axon IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of voltage-gated potassium channel complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
voltage-gated potassium channel subunit beta-1
Names
potassium voltage-gated channel subfamily A member regulatory beta subunit 1
potassium voltage-gated channel, shaker-related subfamily, beta member 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Alligator sinensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM45574v1 Primary Assembly

Genomic

  1. NW_005841858.1 Reference ASM45574v1 Primary Assembly

    Range
    2251991..2568370
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006016463.2 → XP_006016525.1  voltage-gated potassium channel subunit beta-1 isoform X1

    UniProtKB/TrEMBL
    A0A1U7REE9
    Conserved Domains (2) summary
    cd06660
    Location:80 → 395
    Aldo_ket_red; Aldo-keto reductases (AKRs) are a superfamily of soluble NAD(P)(H) oxidoreductases whose chief purpose is to reduce aldehydes and ketones to primary and secondary alcohols. AKRs are present in all phyla and are of importance to both health and industrial ...
    TIGR01293
    Location:80 → 396
    Kv_beta; voltage-dependent potassium channel beta subunit, animal

  2. XM_025214889.1 → XP_025070674.1  voltage-gated potassium channel subunit beta-1 isoform X6

    UniProtKB/TrEMBL
    A0A3Q0HFF9
    Conserved Domains (1) summary
    cl00470
    Location:80 → 324
    Aldo_ket_red; Aldo-keto reductases (AKRs) are a superfamily of soluble NAD(P)(H) oxidoreductases whose chief purpose is to reduce aldehydes and ketones to primary and secondary alcohols. AKRs are present in all phyla and are of importance to both health and industrial ...

  3. XM_025214881.1 → XP_025070666.1  voltage-gated potassium channel subunit beta-1 isoform X4

    UniProtKB/TrEMBL
    A0A3Q0HFB5
    Conserved Domains (1) summary
    cl00470
    Location:80 → 367
    Aldo_ket_red; Aldo-keto reductases (AKRs) are a superfamily of soluble NAD(P)(H) oxidoreductases whose chief purpose is to reduce aldehydes and ketones to primary and secondary alcohols. AKRs are present in all phyla and are of importance to both health and industrial ...

  4. XM_025214876.1 → XP_025070661.1  voltage-gated potassium channel subunit beta-1 isoform X3

    UniProtKB/TrEMBL
    A0A3Q0HFA9
    Conserved Domains (1) summary
    TIGR01293
    Location:80 → 381
    Kv_beta; voltage-dependent potassium channel beta subunit, animal

  5. XM_006016464.2 → XP_006016526.1  voltage-gated potassium channel subunit beta-1 isoform X2

    UniProtKB/TrEMBL
    A0A1U7R349
    Conserved Domains (2) summary
    cd06660
    Location:73 → 388
    Aldo_ket_red; Aldo-keto reductases (AKRs) are a superfamily of soluble NAD(P)(H) oxidoreductases whose chief purpose is to reduce aldehydes and ketones to primary and secondary alcohols. AKRs are present in all phyla and are of importance to both health and industrial ...
    TIGR01293
    Location:73 → 389
    Kv_beta; voltage-dependent potassium channel beta subunit, animal

  6. XM_014524503.2 → XP_014379989.1  voltage-gated potassium channel subunit beta-1 isoform X5

    UniProtKB/TrEMBL
    A0A1U8DQJ9
    Conserved Domains (2) summary
    cd06660
    Location:73 → 359
    Aldo_ket_red; Aldo-keto reductases (AKRs) are a superfamily of soluble NAD(P)(H) oxidoreductases whose chief purpose is to reduce aldehydes and ketones to primary and secondary alcohols. AKRs are present in all phyla and are of importance to both health and industrial ...
    TIGR01293
    Location:73 → 360
    Kv_beta; voltage-dependent potassium channel beta subunit, animal
Nucleotide Protein
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