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ZNF143B zinc finger protein 143b [ Latimeria chalumnae (coelacanth) ]

Gene ID: 102365714, updated on 2-May-2024

Summary

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Gene symbol
ZNF143B
Gene description
zinc finger protein 143b
See related
Ensembl:ENSLACG00000017669
Gene type
protein coding
RefSeq status
MODEL
Organism
Latimeria chalumnae
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Coelacanthiformes; Coelacanthidae; Latimeria
Also known as
ZNF143
Orthologs
zebrafish all
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Genomic context

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See ZNF143B in Genome Data Viewer
Location:
chromosome: 17
Exon count:
17
Annotation release Status Assembly Chr Location
RS_2024_04 current fLatCha1.pri (GCF_037176945.1) 17 NC_088155.1 (18956834..18988659, complement)
101 previous assembly LatCha1 (GCF_000225785.1) Unplaced Scaffold NW_005819058.1 (2286079..2318271)

Chromosome 17 - NC_088155.1Genomic Context describing neighboring genes Neighboring gene switching B cell complex subunit SWAP70 Neighboring gene WEE1 G2 checkpoint kinase Neighboring gene small nucleolar RNA SNORA23 Neighboring gene importin 7 Neighboring gene small nucleolar RNA SNORA23

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger protein 143

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_037176945.1-RS_2024_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fLatCha1.pri

Genomic

  1. NC_088155.1 Reference fLatCha1.pri

    Range
    18956834..18988659 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005989683.3 → XP_005989745.1  zinc finger protein 143 isoform X1

    See identical proteins and their annotated locations for XP_005989745.1

    UniProtKB/TrEMBL
    H3BDY3
    Conserved Domains (3) summary
    sd00017
    Location:239 → 261
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam13465
    Location:313 → 340
    zf-H2C2_2; Zinc-finger double domain
    pfam15909
    Location:329 → 414
    zf-C2H2_8; C2H2-type zinc ribbon

  2. XM_064567262.1 → XP_064423332.1  zinc finger protein 143 isoform X2

  3. XM_005989682.3 → XP_005989744.1  zinc finger protein 143 isoform X1

    See identical proteins and their annotated locations for XP_005989744.1

    UniProtKB/TrEMBL
    H3BDY3
    Related
    ENSLACP00000020104.1
    Conserved Domains (3) summary
    sd00017
    Location:239 → 261
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam13465
    Location:313 → 340
    zf-H2C2_2; Zinc-finger double domain
    pfam15909
    Location:329 → 414
    zf-C2H2_8; C2H2-type zinc ribbon
Nucleotide Protein
Heading Accession and Version

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