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LOC102364328 trafficking protein particle complex subunit 6B [ Latimeria chalumnae (coelacanth) ]

Gene ID: 102364328, updated on 4-May-2024

Summary

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Gene symbol
LOC102364328
Gene description
trafficking protein particle complex subunit 6B
See related
Ensembl:ENSLACG00000004986
Gene type
protein coding
RefSeq status
MODEL
Organism
Latimeria chalumnae
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Coelacanthiformes; Coelacanthidae; Latimeria
Also known as
TRAPPC6B
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Genomic context

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Location:
chromosome: 11
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2024_04 current fLatCha1.pri (GCF_037176945.1) 11 NC_088149.1 (36883573..36895074, complement)
101 previous assembly LatCha1 (GCF_000225785.1) Unplaced Scaffold NW_005819047.1 (149278..159602, complement)

Chromosome 11 - NC_088149.1Genomic Context describing neighboring genes Neighboring gene U5 spliceosomal RNA Neighboring gene uncharacterized LOC102354498 Neighboring gene gem (nuclear organelle) associated protein 2 Neighboring gene uncharacterized LOC135359426 Neighboring gene pinin, desmosome associated protein Neighboring gene MIA SH3 domain ER export factor 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in endoplasmic reticulum to Golgi vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of GTPase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of TRAPP complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cis-Golgi network IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in trans-Golgi network IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
trafficking protein particle complex subunit 6B
Names
trafficking protein particle complex 6b

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_037176945.1-RS_2024_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fLatCha1.pri

Genomic

  1. NC_088149.1 Reference fLatCha1.pri

    Range
    36883573..36895074 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005989147.2 → XP_005989209.1  trafficking protein particle complex subunit 6B

    UniProtKB/TrEMBL
    H3A7I8
    Related
    ENSLACP00000005609.1
    Conserved Domains (1) summary
    cd14944
    Location:8 → 161
    TRAPPC6A_Trs33; Trs33 subunit of the TRAPP complex
Nucleotide Protein
Heading Accession and Version

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