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LOC102360152 V-type proton ATPase subunit d 2 [ Latimeria chalumnae (coelacanth) ]

Gene ID: 102360152, updated on 26-Apr-2024

Summary

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Gene symbol
LOC102360152
Gene description
V-type proton ATPase subunit d 2
See related
Ensembl:ENSLACG00000000225
Gene type
protein coding
RefSeq status
MODEL
Organism
Latimeria chalumnae
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Coelacanthiformes; Coelacanthidae; Latimeria
Also known as
ATP6V0D2
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Genomic context

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Location:
chromosome: 2
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2024_04 current fLatCha1.pri (GCF_037176945.1) 2 NC_088140.1 (327312845..327362553)
101 previous assembly LatCha1 (GCF_000225785.1) Unplaced Scaffold NW_005819743.1 (634..50327)

Chromosome 2 - NC_088140.1Genomic Context describing neighboring genes Neighboring gene carbonic anhydrase 13 Neighboring gene ribosomal biogenesis factor Neighboring gene serine/threonine-protein kinase H1-like Neighboring gene uncharacterized LOC135355078 Neighboring gene uncharacterized LOC135354862 Neighboring gene NEDD4-like E3 ubiquitin-protein ligase WWP1 Neighboring gene regulator of microtubule dynamics 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables proton-transporting ATPase activity, rotational mechanism IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in proton transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in vacuolar acidification IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in vacuolar transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in early endosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in lysosomal membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of plasma membrane proton-transporting V-type ATPase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of proton-transporting V-type ATPase, V0 domain IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of vacuolar proton-transporting V-type ATPase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
V-type proton ATPase subunit d 2
Names
ATPase H+ transporting V0 subunit d2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_037176945.1-RS_2024_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fLatCha1.pri

Genomic

  1. NC_088140.1 Reference fLatCha1.pri

    Range
    327312845..327362553
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006001794.3 → XP_006001856.1  V-type proton ATPase subunit d 2

    UniProtKB/TrEMBL
    H2ZS79
    Related
    ENSLACP00000000250.1
    Conserved Domains (2) summary
    COG1527
    Location:14 → 350
    NtpC; Archaeal/vacuolar-type H+-ATPase subunit C/Vma6 [Energy production and conversion]
    pfam01992
    Location:16 → 339
    vATP-synt_AC39; ATP synthase (C/AC39) subunit
Nucleotide Protein
Heading Accession and Version

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