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SUN1B Sad1 and UNC84 domain containing 1b [ Latimeria chalumnae (coelacanth) ]

Gene ID: 102354065, updated on 6-Jun-2024

Summary

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Gene symbol
SUN1B
Gene description
Sad1 and UNC84 domain containing 1b
See related
Ensembl:ENSLACG00000014915
Gene type
protein coding
RefSeq status
MODEL
Organism
Latimeria chalumnae
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Coelacanthiformes; Coelacanthidae; Latimeria
Also known as
SUN1
Orthologs
zebrafish all
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Genomic context

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Location:
chromosome: 5
Exon count:
23
Annotation release Status Assembly Chr Location
RS_2024_04 current fLatCha1.pri (GCF_037176945.1) 5 NC_088143.1 (91941747..92014618)
101 previous assembly LatCha1 (GCF_000225785.1) Unplaced Scaffold NW_005819358.1 (1122825..1201090)

Chromosome 5 - NC_088143.1Genomic Context describing neighboring genes Neighboring gene dynein axonemal assembly factor 5 Neighboring gene uncharacterized LOC102353900 Neighboring gene guided entry of tail-anchored proteins factor 4 Neighboring gene arf-GAP with dual PH domain-containing protein 1 Neighboring gene 5S ribosomal RNA

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein-membrane adaptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of meiotic nuclear membrane microtubule tethering complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nuclear envelope IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
SUN domain-containing protein 1
Names
Sad1 and UNC84 domain containing 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_037176945.1-RS_2024_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fLatCha1.pri

Genomic

  1. NC_088143.1 Reference fLatCha1.pri

    Range
    91941747..92014618
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005996962.2 → XP_005997024.1  SUN domain-containing protein 1 isoform X1

    UniProtKB/TrEMBL
    H3B4W3, M3XGS8
    Related
    ENSLACP00000016934.1
    Conserved Domains (3) summary
    pfam07738
    Location:786 → 920
    Sad1_UNC; Sad1 / UNC-like C-terminal
    pfam09387
    Location:371 → 410
    MRP; Mitochondrial RNA binding protein MRP
    pfam15121
    Location:28 → 81
    TMEM71; TMEM71 protein family

  2. XM_005996964.3 → XP_005997026.1  SUN domain-containing protein 1 isoform X3

    UniProtKB/TrEMBL
    M3XGS8
    Conserved Domains (3) summary
    pfam07738
    Location:785 → 919
    Sad1_UNC; Sad1 / UNC-like C-terminal
    pfam09387
    Location:371 → 410
    MRP; Mitochondrial RNA binding protein MRP
    pfam15121
    Location:28 → 81
    TMEM71; TMEM71 protein family

  3. XM_005996963.2 → XP_005997025.1  SUN domain-containing protein 1 isoform X2

    UniProtKB/TrEMBL
    M3XGS8
    Conserved Domains (3) summary
    pfam07738
    Location:785 → 919
    Sad1_UNC; Sad1 / UNC-like C-terminal
    pfam09387
    Location:371 → 410
    MRP; Mitochondrial RNA binding protein MRP
    pfam15121
    Location:28 → 81
    TMEM71; TMEM71 protein family

  4. XM_005996965.2 → XP_005997027.1  SUN domain-containing protein 1 isoform X4

    UniProtKB/TrEMBL
    M3XGS8
    Conserved Domains (3) summary
    pfam07738
    Location:753 → 887
    Sad1_UNC; Sad1 / UNC-like C-terminal
    pfam09387
    Location:76 → 377
    MRP; Mitochondrial RNA binding protein MRP
    pfam15121
    Location:28 → 81
    TMEM71; TMEM71 protein family

  5. XM_005996966.3 → XP_005997028.1  SUN domain-containing protein 1 isoform X5

    UniProtKB/TrEMBL
    M3XGS8
    Conserved Domains (3) summary
    pfam07738
    Location:745 → 879
    Sad1_UNC; Sad1 / UNC-like C-terminal
    pfam09387
    Location:76 → 369
    MRP; Mitochondrial RNA binding protein MRP
    pfam15121
    Location:28 → 81
    TMEM71; TMEM71 protein family

  6. XM_005996967.3 → XP_005997029.1  SUN domain-containing protein 1 isoform X6

    UniProtKB/TrEMBL
    M3XGS8
    Conserved Domains (3) summary
    pfam07738
    Location:717 → 851
    Sad1_UNC; Sad1 / UNC-like C-terminal
    pfam09387
    Location:76 → 341
    MRP; Mitochondrial RNA binding protein MRP
    pfam15121
    Location:28 → 81
    TMEM71; TMEM71 protein family
Nucleotide Protein
Heading Accession and Version

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