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PCMT protein-L-isoaspartate (D-aspartate) O-methyltransferase [ Latimeria chalumnae (coelacanth) ]

Gene ID: 102347286, updated on 26-Apr-2024

Summary

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Gene symbol
PCMT
Gene description
protein-L-isoaspartate (D-aspartate) O-methyltransferase
See related
Ensembl:ENSLACG00000006397
Gene type
protein coding
RefSeq status
MODEL
Organism
Latimeria chalumnae
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Coelacanthiformes; Coelacanthidae; Latimeria
Also known as
PCMT1
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 3
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2024_04 current fLatCha1.pri (GCF_037176945.1) 3 NC_088141.1 (132657012..132784440)
101 previous assembly LatCha1 (GCF_000225785.1) Unplaced Scaffold NW_005820562.1 (215892..350366, complement)

Chromosome 3 - NC_088141.1Genomic Context describing neighboring genes Neighboring gene nucleoporin 43 Neighboring gene uncharacterized LOC106705658 Neighboring gene U6atac minor spliceosomal RNA Neighboring gene uncharacterized LOC106705657 Neighboring gene low density lipoprotein receptor-related protein 11 Neighboring gene zinc finger BED domain-containing protein 5-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein-L-isoaspartate (D-aspartate) O-methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein modification process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein-L-isoaspartate(D-aspartate) O-methyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_037176945.1-RS_2024_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fLatCha1.pri

Genomic

  1. NC_088141.1 Reference fLatCha1.pri

    Range
    132657012..132784440
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014495481.1 → XP_014350967.1  protein-L-isoaspartate(D-aspartate) O-methyltransferase isoform X2

    UniProtKB/TrEMBL
    H3AC41
    Related
    ENSLACP00000007212.2, ENSLACT00000007272.2

  2. XM_006007534.3 → XP_006007596.1  protein-L-isoaspartate(D-aspartate) O-methyltransferase isoform X1

    Conserved Domains (2) summary
    pfam01135
    Location:59 → 265
    PCMT; Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT)
    cl17173
    Location:62 → 268
    AdoMet_MTases; S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). ...
Nucleotide Protein
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