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LOC102312784 protein PET100 homolog, mitochondrial [ Haplochromis burtoni (Burton's mouthbrooder) ]

Gene ID: 102312784, updated on 10-Mar-2024

Summary

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Gene symbol
LOC102312784
Gene description
protein PET100 homolog, mitochondrial
See related
Ensembl:ENSHBUG00000002935
Gene type
protein coding
RefSeq status
MODEL
Organism
Haplochromis burtoni
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids; Pseudocrenilabrinae; Haplochromini; Haplochromis
Also known as
pet100
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
4
Annotation release Status Assembly Chr Location
102 current NCSU_Asbu1 (GCF_018398535.1) Unplaced Scaffold NW_024582696.1 (581017..584322)
101 previous assembly AstBur1.0 (GCF_000239415.1) Unplaced Scaffold NW_005179736.1 (579234..582537)

NW_024582696.1Genomic Context describing neighboring genes Neighboring gene lysophosphatidic acid receptor 2a Neighboring gene bromodomain containing 4 Neighboring gene syntaxin binding protein 2 Neighboring gene uncharacterized LOC102313615

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Comparative transcriptomics of Eastern African cichlid fishes shows signs of positive selection and a large contribution of untranslated regions to genetic diversity. Baldo L, et al. Genome Biol Evol, 2011. PMID 21617250, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables unfolded protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mitochondrial cytochrome c oxidase assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrial inner membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein PET100 homolog, mitochondrial
Names
PET100 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Haplochromis burtoni Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NCSU_Asbu1 Primary Assembly

Genomic

  1. NW_024582696.1 Reference NCSU_Asbu1 Primary Assembly

    Range
    581017..584322
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005942326.3 → XP_005942388.1  protein PET100 homolog, mitochondrial

    See identical proteins and their annotated locations for XP_005942388.1

    UniProtKB/TrEMBL
    A0A3Q2UVM6
    Related
    ENSHBUP00000001764.1
    Conserved Domains (1) summary
    pfam09803
    Location:2 → 61
    Pet100
Nucleotide Protein
Heading Accession and Version

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