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pir pirin [ Haplochromis burtoni (Burton's mouthbrooder) ]

Gene ID: 102309579, updated on 10-Mar-2024

Summary

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Gene symbol
pir
Gene description
pirin
See related
Ensembl:ENSHBUG00000023134
Gene type
protein coding
RefSeq status
MODEL
Organism
Haplochromis burtoni
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids; Pseudocrenilabrinae; Haplochromini; Haplochromis
Annotation information
Annotation category: partial on reference assembly
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
102 current NCSU_Asbu1 (GCF_018398535.1) Unplaced Scaffold NW_024582623.1 (733282..739799)
101 previous assembly AstBur1.0 (GCF_000239415.1) Unplaced Scaffold NW_005179772.1 (456757..463274)

NW_024582623.1Genomic Context describing neighboring genes Neighboring gene interleukin-1 family member A Neighboring gene uncharacterized LOC102309073 Neighboring gene vascular endothelial growth factor D Neighboring gene gastrin-releasing peptide receptor

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables quercetin 2,3-dioxygenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in monocyte differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
pirin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Haplochromis burtoni Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NCSU_Asbu1 Primary Assembly

Genomic

  1. NW_024582623.1 Reference NCSU_Asbu1 Primary Assembly

    Range
    733282..739799
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014340405.1 → XP_014195891.1  pirin

    Related
    ENSHBUP00000035156.1, ENSHBUT00000030584.1
    Conserved Domains (1) summary
    COG1741
    Location:1 → 273
    YhaK; Redox-sensitive bicupin YhaK, pirin superfamily [General function prediction only]
Nucleotide Protein
Heading Accession and Version

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