U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

slc12a2 solute carrier family 12 member 2 [ Haplochromis burtoni (Burton's mouthbrooder) ]

Gene ID: 102307226, updated on 19-Jun-2024

Summary

Go to the top of the page Help
Gene symbol
slc12a2
Gene description
solute carrier family 12 member 2
See related
Ensembl:ENSHBUG00000000179
Gene type
protein coding
RefSeq status
MODEL
Organism
Haplochromis burtoni
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids; Pseudocrenilabrinae; Haplochromini; Haplochromis
Orthologs
human zebrafish all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: Un
Exon count:
27
Annotation release Status Assembly Chr Location
102 current NCSU_Asbu1 (GCF_018398535.1) Unplaced Scaffold NW_024582474.1 (979452..1043545)
101 previous assembly AstBur1.0 (GCF_000239415.1) Unplaced Scaffold NW_005179502.1 (953121..1018020)

NW_024582474.1Genomic Context describing neighboring genes Neighboring gene proline-rich coiled-coil 1 Neighboring gene solute carrier family 27 member 6 Neighboring gene membrane integral NOTCH2 associated receptor 2 Neighboring gene apical junction component 1 homolog

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ammonium channel activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables sodium:potassium:chloride symporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell volume homeostasis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in chloride ion homeostasis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in chloride transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in potassium ion homeostasis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in potassium ion import across plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sodium ion homeostasis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sodium ion transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
solute carrier family 12 member 2

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Haplochromis burtoni Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NCSU_Asbu1 Primary Assembly

Genomic

  1. NW_024582474.1 Reference NCSU_Asbu1 Primary Assembly

    Range
    979452..1043545
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005928987.3 → XP_005929049.1  solute carrier family 12 member 2 isoform X1

    See identical proteins and their annotated locations for XP_005929049.1

    UniProtKB/TrEMBL
    A0A3Q2VDK2, A0A3Q2WI61
    Related
    ENSHBUP00000005803.1
    Conserved Domains (1) summary
    TIGR00930
    Location:148 → 1151
    2a30; K-Cl cotransporter

  2. XM_005928988.3 → XP_005929050.1  solute carrier family 12 member 2 isoform X2

    See identical proteins and their annotated locations for XP_005929050.1

    UniProtKB/TrEMBL
    A0A3Q2WI61, A0A3Q3CLF3
    Related
    ENSHBUP00000025272.1
    Conserved Domains (1) summary
    TIGR00930
    Location:148 → 1135
    2a30; K-Cl cotransporter
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.