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HLTF helicase like transcription factor [ Bos mutus (wild yak) ]

Gene ID: 102266018, updated on 10-Mar-2024

Summary

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Gene symbol
HLTF
Gene description
helicase like transcription factor
Locus tag
M91_03215
See related
Ensembl:ENSBMUG00000022266
Gene type
protein coding
RefSeq status
MODEL
Organism
Bos mutus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
26
Annotation release Status Assembly Chr Location
101 current BosGru_v2.0 (GCF_000298355.1) Unplaced Scaffold NW_005394541.1 (528559..592121, complement)

NW_005394541.1Genomic Context describing neighboring genes Neighboring gene carboxypeptidase A3 Neighboring gene glycogenin 1 Neighboring gene 40S ribosomal protein S6-like Neighboring gene HPS3 biogenesis of lysosomal organelles complex 2 subunit 1 Neighboring gene ceruloplasmin

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005394541.1 Unplaced Scaffold Reference BosGru_v2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP-dependent chromatin remodeler activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables nucleic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
helicase-like transcription factor

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bos mutus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference BosGru_v2.0 Primary Assembly

Genomic

  1. NW_005394541.1 Reference BosGru_v2.0 Primary Assembly

    Range
    528559..592121 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005902437.2 → XP_005902499.1  helicase-like transcription factor

    UniProtKB/TrEMBL
    L8I5Z2
    Related
    ENSBMUP00000029821.1, ENSBMUT00000034317.1
    Conserved Domains (6) summary
    smart00487
    Location:238 → 359
    DEXDc; DEAD-like helicases superfamily
    cd00046
    Location:472 → 588
    DEXDc; DEAD-like helicases superfamily. A diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.
    cd00162
    Location:759 → 804
    RING; RING-finger (Really Interesting New Gene) domain, a specialized type of Zn-finger of 40 to 60 residues that binds two atoms of zinc; defined by the 'cross-brace' motif C-X2-C-X(9-39)-C-X(1-3)- H-X(2-3)-(N/C/H)-X2-C-X(4-48)C-X2-C; probably involved in ...
    pfam00176
    Location:472 → 722
    SNF2_N; SNF2 family N-terminal domain
    pfam00271
    Location:832 → 950
    Helicase_C; Helicase conserved C-terminal domain
    pfam08797
    Location:60 → 155
    HIRAN; HIRAN domain
Nucleotide Protein
Heading Accession and Version

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