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RNF135 ring finger protein 135 [ Myotis brandtii (Brandt's bat) ]

Gene ID: 102257239, updated on 30-Mar-2024

Summary

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Gene symbol
RNF135
Gene description
ring finger protein 135
Locus tag
D623_10019623
Gene type
protein coding
RefSeq status
MODEL
Organism
Myotis brandtii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Vespertilionidae; Myotis
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
101 current ASM41265v1 (GCF_000412655.1) Unplaced Scaffold NW_005369902.1 (1251622..1262322)

NW_005369902.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC102256330 Neighboring gene ArfGAP with dual PH domains 2 Neighboring gene PRAME family member 12 pseudogene Neighboring gene C-C motif chemokine 13

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005369902.1 Unplaced Scaffold Reference ASM41265v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome analysis reveals insights into physiology and longevity of the Brandt's bat Myotis brandtii. Seim I, et al. Nat Commun, 2013. PMID 23962925, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ribonucleoprotein complex binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ubiquitin-protein transferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of innate immune response IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
E3 ubiquitin-protein ligase RNF135

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Myotis brandtii Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM41265v1

Genomic

  1. NW_005369902.1 Reference ASM41265v1

    Range
    1251622..1262322
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014548871.1 → XP_014404357.1  E3 ubiquitin-protein ligase RNF135 isoform X2

    Conserved Domains (1) summary
    cd12902
    Location:135 → 302
    SPRY_PRY_RNF135; PRY/SPRY domain in RING finger protein RNF135

  2. XM_005877613.2 → XP_005877675.1  E3 ubiquitin-protein ligase RNF135 isoform X1

    See identical proteins and their annotated locations for XP_005877675.1

    UniProtKB/TrEMBL
    S7NE84
    Conserved Domains (1) summary
    cd12902
    Location:167 → 334
    SPRY_PRY_RNF135; PRY/SPRY domain in RING finger protein RNF135
Nucleotide Protein
Heading Accession and Version

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