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VIPAS39 VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog [ Myotis brandtii (Brandt's bat) ]

Gene ID: 102252257, updated on 30-Mar-2024

Summary

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Gene symbol
VIPAS39
Gene description
VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog
Locus tag
D623_10029020
Gene type
protein coding
RefSeq status
MODEL
Organism
Myotis brandtii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Vespertilionidae; Myotis
Orthologs
human mouse all
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Genomic context

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See VIPAS39 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
21
Annotation release Status Assembly Chr Location
101 current ASM41265v1 (GCF_000412655.1) Unplaced Scaffold NW_005354673.1 (4511570..4537658)

NW_005354673.1Genomic Context describing neighboring genes Neighboring gene isthmin 2 Neighboring gene activator of HSP90 ATPase activity 1 Neighboring gene 60S ribosomal protein L29 pseudogene Neighboring gene NADP dependent oxidoreductase domain containing 1 Neighboring gene sterile alpha motif domain containing 15

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005354673.1 Unplaced Scaffold Reference ASM41265v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in intracellular protein transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in vacuolar transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
spermatogenesis-defective protein 39 homolog
Names
VPS33B-interacting protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Myotis brandtii Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM41265v1

Genomic

  1. NW_005354673.1 Reference ASM41265v1

    Range
    4511570..4537658
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005860158.2 → XP_005860220.1  spermatogenesis-defective protein 39 homolog

    See identical proteins and their annotated locations for XP_005860220.1

    UniProtKB/TrEMBL
    S7MHR0
    Conserved Domains (1) summary
    pfam09787
    Location:26 → 471
    Golgin_A5; Golgin subfamily A member 5

  2. XM_005860157.2 → XP_005860219.1  spermatogenesis-defective protein 39 homolog

    See identical proteins and their annotated locations for XP_005860219.1

    UniProtKB/TrEMBL
    S7MHR0
    Conserved Domains (1) summary
    pfam09787
    Location:26 → 471
    Golgin_A5; Golgin subfamily A member 5
Nucleotide Protein
Heading Accession and Version

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