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FANCM FA complementation group M [ Myotis brandtii (Brandt's bat) ]

Gene ID: 102251343, updated on 30-Mar-2024

Summary

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Gene symbol
FANCM
Gene description
FA complementation group M
Locus tag
D623_10025438
Gene type
protein coding
RefSeq status
MODEL
Organism
Myotis brandtii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Vespertilionidae; Myotis
Orthologs
human mouse all
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Genomic context

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See FANCM in Genome Data Viewer
Location:
chromosome: Un
Exon count:
24
Annotation release Status Assembly Chr Location
101 current ASM41265v1 (GCF_000412655.1) Unplaced Scaffold NW_005369060.1 (2163924..2239045, complement)

NW_005369060.1Genomic Context describing neighboring genes Neighboring gene 60S ribosomal protein L31 pseudogene Neighboring gene uncharacterized LOC106727908 Neighboring gene MIS18 binding protein 1 Neighboring gene 60S ribosomal protein L35a pseudogene Neighboring gene 60S ribosomal protein L35a pseudogene Neighboring gene FKBP prolyl isomerase 3 Neighboring gene pre-mRNA processing factor 39

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005369060.1 Unplaced Scaffold Reference ASM41265v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 3'-5' DNA helicase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables four-way junction DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables four-way junction helicase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables nuclease activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in double-strand break repair via synthesis-dependent strand annealing IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in interstrand cross-link repair IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in replication fork reversal IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
Fanconi anemia group M protein
Names
Fanconi anemia complementation group M

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Myotis brandtii Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM41265v1

Genomic

  1. NW_005369060.1 Reference ASM41265v1

    Range
    2163924..2239045 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014548190.1 → XP_014403676.1  Fanconi anemia group M protein isoform X2

    Conserved Domains (7) summary
    COG1111
    Location:86 → 619
    MPH1; ERCC4-related helicase [Replication, recombination and repair]
    cd00046
    Location:109 → 251
    DEXDc; DEAD-like helicases superfamily. A diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.
    cd00079
    Location:445 → 590
    HELICc; Helicase superfamily c-terminal domain; associated with DEXDc-, DEAD-, and DEAH-box proteins, yeast initiation factor 4A, Ski2p, and Hepatitis C virus NS3 helicases; this domain is found in a wide variety of helicases and helicase related proteins; may ...
    cd12091
    Location:301 → 416
    FANCM_ID; Insert domain of FANCM and related proteins
    pfam02732
    Location:1765 → 1891
    ERCC4; ERCC4 domain
    pfam09444
    Location:1451 → 1531
    MRC1; MRC1-like domain
    pfam16783
    Location:622 → 736
    FANCM-MHF_bd; FANCM to MHF binding domain

  2. XM_014548191.1 → XP_014403677.1  Fanconi anemia group M protein isoform X3

    Conserved Domains (7) summary
    COG1111
    Location:86 → 618
    MPH1; ERCC4-related helicase [Replication, recombination and repair]
    cd00046
    Location:109 → 251
    DEXDc; DEAD-like helicases superfamily. A diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.
    cd00079
    Location:445 → 590
    HELICc; Helicase superfamily c-terminal domain; associated with DEXDc-, DEAD-, and DEAH-box proteins, yeast initiation factor 4A, Ski2p, and Hepatitis C virus NS3 helicases; this domain is found in a wide variety of helicases and helicase related proteins; may ...
    cd12091
    Location:301 → 416
    FANCM_ID; Insert domain of FANCM and related proteins
    pfam02732
    Location:1631 → 1757
    ERCC4; ERCC4 domain
    pfam09444
    Location:1505 → 1585
    MRC1; MRC1-like domain
    pfam16783
    Location:676 → 790
    FANCM-MHF_bd; FANCM to MHF binding domain

  3. XM_014548189.1 → XP_014403675.1  Fanconi anemia group M protein isoform X1

    UniProtKB/TrEMBL
    S7NCY2
    Conserved Domains (7) summary
    COG1111
    Location:86 → 618
    MPH1; ERCC4-related helicase [Replication, recombination and repair]
    cd00046
    Location:109 → 251
    DEXDc; DEAD-like helicases superfamily. A diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.
    cd00079
    Location:445 → 590
    HELICc; Helicase superfamily c-terminal domain; associated with DEXDc-, DEAD-, and DEAH-box proteins, yeast initiation factor 4A, Ski2p, and Hepatitis C virus NS3 helicases; this domain is found in a wide variety of helicases and helicase related proteins; may ...
    cd12091
    Location:301 → 416
    FANCM_ID; Insert domain of FANCM and related proteins
    pfam02732
    Location:1819 → 1945
    ERCC4; ERCC4 domain
    pfam09444
    Location:1505 → 1585
    MRC1; MRC1-like domain
    pfam16783
    Location:676 → 790
    FANCM-MHF_bd; FANCM to MHF binding domain

  4. XM_014548192.1 → XP_014403678.1  Fanconi anemia group M protein isoform X4

    Conserved Domains (5) summary
    cd00079
    Location:66 → 211
    HELICc; Helicase superfamily c-terminal domain; associated with DEXDc-, DEAD-, and DEAH-box proteins, yeast initiation factor 4A, Ski2p, and Hepatitis C virus NS3 helicases; this domain is found in a wide variety of helicases and helicase related proteins; may ...
    cl17041
    Location:1 → 37
    helicase_insert_domain; helicase_insert_domain
    pfam02732
    Location:1440 → 1566
    ERCC4; ERCC4 domain
    pfam09444
    Location:1126 → 1206
    MRC1; MRC1-like domain
    pfam16783
    Location:297 → 411
    FANCM-MHF_bd; FANCM to MHF binding domain
Nucleotide Protein
Heading Accession and Version

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