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DDX39B DExD-box helicase 39B [ Myotis brandtii (Brandt's bat) ]

Gene ID: 102249384, updated on 30-Mar-2024

Summary

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Gene symbol
DDX39B
Gene description
DExD-box helicase 39B
Locus tag
D623_10007274
Gene type
protein coding
RefSeq status
MODEL
Organism
Myotis brandtii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Vespertilionidae; Myotis
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
101 current ASM41265v1 (GCF_000412655.1) Unplaced Scaffold NW_005354596.1 (694301..707057)

NW_005354596.1Genomic Context describing neighboring genes Neighboring gene lymphotoxin alpha Neighboring gene ATPase H+ transporting V1 subunit G2 Neighboring gene mitochondrial coiled-coil domain 1 Neighboring gene saoe class I histocompatibility antigen, A alpha chain

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005354596.1 Unplaced Scaffold Reference ASM41265v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA helicase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mRNA export from nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mRNA splicing, via spliceosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
spliceosome RNA helicase DDX39B
Names
DEAD-box helicase 39B
Spliceosome RNA helicase DDX39B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Myotis brandtii Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM41265v1

Genomic

  1. NW_005354596.1 Reference ASM41265v1

    Range
    694301..707057
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005859896.2 → XP_005859958.1  spliceosome RNA helicase DDX39B

    See identical proteins and their annotated locations for XP_005859958.1

    UniProtKB/TrEMBL
    S7P184
    Conserved Domains (2) summary
    cd18787
    Location:262 → 391
    SF2_C_DEAD; C-terminal helicase domain of the DEAD box helicases
    cd17950
    Location:44 → 251
    DEADc_DDX39; DEAD-box helicase domain of DEAD box protein 39

  2. XM_014534495.1 → XP_014389981.1  spliceosome RNA helicase DDX39B

    UniProtKB/TrEMBL
    S7P184
    Conserved Domains (2) summary
    cd18787
    Location:262 → 391
    SF2_C_DEAD; C-terminal helicase domain of the DEAD box helicases
    cd17950
    Location:44 → 251
    DEADc_DDX39; DEAD-box helicase domain of DEAD box protein 39
Nucleotide Protein
Heading Accession and Version

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