U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

ARID2 AT-rich interaction domain 2 [ Myotis brandtii (Brandt's bat) ]

Gene ID: 102245590, updated on 30-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
ARID2
Gene description
AT-rich interaction domain 2
Locus tag
D623_10029493
Gene type
protein coding
RefSeq status
MODEL
Organism
Myotis brandtii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Vespertilionidae; Myotis
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: Un
Exon count:
23
Annotation release Status Assembly Chr Location
101 current ASM41265v1 (GCF_000412655.1) Unplaced Scaffold NW_005370683.1 (5828745..6023763)

NW_005370683.1Genomic Context describing neighboring genes Neighboring gene ubiquitin-40S ribosomal protein S27a pseudogene Neighboring gene ubiquitin-40S ribosomal protein S27a pseudogene Neighboring gene serologically defined colon cancer antigen 3 homolog pseudogene Neighboring gene SR-related CTD associated factor 11

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_005370683.1 Unplaced Scaffold Reference ASM41265v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of SWI/SNF superfamily-type complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
AT-rich interactive domain-containing protein 2

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Myotis brandtii Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM41265v1

Genomic

  1. NW_005370683.1 Reference ASM41265v1

    Range
    5828745..6023763
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014529534.1 → XP_014385020.1  AT-rich interactive domain-containing protein 2 isoform X3

    UniProtKB/TrEMBL
    S7NIS9
    Conserved Domains (2) summary
    pfam09606
    Location:532 → 916
    Med15; ARC105 or Med15 subunit of Mediator complex non-fungal
    pfam02257
    Location:419 → 499
    RFX_DNA_binding; RFX DNA-binding domain

  2. XM_014529538.1 → XP_014385024.1  AT-rich interactive domain-containing protein 2 isoform X5

    UniProtKB/TrEMBL
    S7NIS9
    Conserved Domains (2) summary
    pfam09606
    Location:485 → 869
    Med15; ARC105 or Med15 subunit of Mediator complex non-fungal
    pfam02257
    Location:372 → 452
    RFX_DNA_binding; RFX DNA-binding domain

  3. XM_014529532.1 → XP_014385018.1  AT-rich interactive domain-containing protein 2 isoform X1

    UniProtKB/TrEMBL
    S7NIS9
    Conserved Domains (2) summary
    pfam09606
    Location:582 → 966
    Med15; ARC105 or Med15 subunit of Mediator complex non-fungal
    pfam02257
    Location:469 → 549
    RFX_DNA_binding; RFX DNA-binding domain

  4. XM_014529537.1 → XP_014385023.1  AT-rich interactive domain-containing protein 2 isoform X4

    UniProtKB/TrEMBL
    S7NIS9
    Conserved Domains (2) summary
    pfam09606
    Location:512 → 896
    Med15; ARC105 or Med15 subunit of Mediator complex non-fungal
    pfam02257
    Location:399 → 479
    RFX_DNA_binding; RFX DNA-binding domain

  5. XM_014529533.1 → XP_014385019.1  AT-rich interactive domain-containing protein 2 isoform X2

    UniProtKB/TrEMBL
    S7NIS9
    Conserved Domains (2) summary
    pfam09606
    Location:564 → 948
    Med15; ARC105 or Med15 subunit of Mediator complex non-fungal
    pfam02257
    Location:451 → 531
    RFX_DNA_binding; RFX DNA-binding domain

  6. XM_014529535.1 → XP_014385021.1  AT-rich interactive domain-containing protein 2 isoform X3

    UniProtKB/TrEMBL
    S7NIS9
    Conserved Domains (2) summary
    pfam09606
    Location:532 → 916
    Med15; ARC105 or Med15 subunit of Mediator complex non-fungal
    pfam02257
    Location:419 → 499
    RFX_DNA_binding; RFX DNA-binding domain

RNA

  1. XR_001359718.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.