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TRNAT-UGU transfer RNA threonine (anticodon UGU) [ Myotis brandtii (Brandt's bat) ]

Gene ID: 102238477, updated on 30-Mar-2024

Summary

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Gene symbol
TRNAT-UGU
Gene description
transfer RNA threonine (anticodon UGU)
Gene type
tRNA
RefSeq status
MODEL
Organism
Myotis brandtii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Vespertilionidae; Myotis
Summary
This record serves to anchor the annotations of this class of tRNAs at multiple locations on the Brandt's bat genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104).
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Genomic context

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Location:
chromosome: Un
Annotation release Status Assembly Chr Location
101 current ASM41265v1 (GCF_000412655.1) Unplaced Scaffold NW_005355985.1 (218752..218824)
101 current ASM41265v1 (GCF_000412655.1) Unplaced Scaffold NW_005358421.1 (452073..452145) , (406950..407022, complement)
101 current ASM41265v1 (GCF_000412655.1) Unplaced Scaffold NW_005358689.1 (564923..564995)

NW_005358689.1Genomic Context describing neighboring genes Neighboring gene dual specificity phosphatase 10 Neighboring gene TATA-box binding protein associated factor, RNA polymerase I subunit A Neighboring gene MIA SH3 domain ER export factor 3

NW_005358421.1Genomic Context describing neighboring genes Neighboring gene ribonuclease A family member 12 (inactive) Neighboring gene transfer RNA leucine (anticodon AAG) Neighboring gene olfactory receptor 6S1 Neighboring gene transfer RNA tyrosine (anticodon GUA) Neighboring gene transfer RNA proline (anticodon UGG)

NW_005355985.1Genomic Context describing neighboring genes Neighboring gene transfer RNA alanine (anticodon UGC) Neighboring gene tripartite motif containing 7 Neighboring gene transfer RNA proline (anticodon UGG) Neighboring gene transfer RNA valine (anticodon AAC)

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Myotis brandtii Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM41265v1

Genomic

  1. NW_005355985.1 Reference ASM41265v1

    Range
    218752..218824
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference ASM41265v1

Genomic

  1. NW_005358421.1 Reference ASM41265v1

    Range
    406950..407022 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference ASM41265v1

Genomic

  1. NW_005358421.1 Reference ASM41265v1

    Range
    452073..452145
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference ASM41265v1

Genomic

  1. NW_005358689.1 Reference ASM41265v1

    Range
    564923..564995
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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