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cldn14 claudin 14 [ Xiphophorus maculatus (southern platyfish) ]

Gene ID: 102235503, updated on 22-Oct-2023

Summary

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Gene symbol
cldn14
Gene description
claudin 14
Gene type
protein coding
RefSeq status
MODEL
Organism
Xiphophorus maculatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Xiphophorus
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Genomic context

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Location:
chromosome: 7
Exon count:
4
Annotation release Status Assembly Chr Location
102 current X_maculatus-5.0-male (GCF_002775205.1) 7 NC_036449.1 (21943857..21947879)
101 previous assembly Xiphophorus_maculatus-4.4.2 (GCF_000241075.1) Unplaced Scaffold NW_005372378.1 (40019..43129)

Chromosome 7 - NC_036449.1Genomic Context describing neighboring genes Neighboring gene ADP-ribosylation factor-like protein 6 Neighboring gene F-box protein 47 Neighboring gene high-affinity choline transporter 1-like Neighboring gene GRIP and coiled-coil domain containing 2 Neighboring gene transmembrane protein 223

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables structural molecule activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in bicellular tight junction assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in bicellular tight junction IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
claudin-14

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xiphophorus maculatus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference X_maculatus-5.0-male Primary Assembly

Genomic

  1. NC_036449.1 Reference X_maculatus-5.0-male Primary Assembly

    Range
    21943857..21947879
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005807663.3 → XP_005807720.1  claudin-14

    UniProtKB/TrEMBL
    M3ZMM5
    Conserved Domains (1) summary
    cl21598
    Location:22 → 181
    PMP22_Claudin; PMP-22/EMP/MP20/Claudin family
Nucleotide Protein Strain
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