U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

ttll6 tubulin tyrosine ligase-like family, member 6 [ Xiphophorus maculatus (southern platyfish) ]

Gene ID: 102216670, updated on 12-Sep-2024

Summary

Go to the top of the page Help
Gene symbol
ttll6
Gene description
tubulin tyrosine ligase-like family, member 6
See related
Ensembl:ENSXMAG00000014927
Gene type
protein coding
RefSeq status
MODEL
Organism
Xiphophorus maculatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Xiphophorus
Orthologs
zebrafish all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 10
Exon count:
18
Annotation release Status Assembly Chr Location
102 current X_maculatus-5.0-male (GCF_002775205.1) 10 NC_036452.1 (15691248..15708215, complement)
101 previous assembly Xiphophorus_maculatus-4.4.2 (GCF_000241075.1) Unplaced Scaffold NW_005372316.1 (1368178..1376481)

Chromosome 10 - NC_036452.1Genomic Context describing neighboring genes Neighboring gene homeobox B5b Neighboring gene homeobox B6b Neighboring gene calcium binding and coiled-coil domain 2 Neighboring gene SNF8 subunit of ESCRT-II

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables tubulin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables tubulin-glutamic acid ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in microtubule cytoskeleton organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein polyglutamylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cilium IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
tubulin polyglutamylase TTLL6
Names
tubulin tyrosine ligase like 6

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Xiphophorus maculatus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference X_maculatus-5.0-male Primary Assembly

Genomic

  1. NC_036452.1 Reference X_maculatus-5.0-male Primary Assembly

    Range
    15691248..15708215 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023340368.1 → XP_023196136.1  tubulin polyglutamylase TTLL6 isoform X1

    UniProtKB/TrEMBL
    A0A3B5R5D0, M4AKG0
    Related
    ENSXMAP00000014954.2, ENSXMAT00000014974.2
    Conserved Domains (2) summary
    pfam03133
    Location:98 → 377
    TTL; Tubulin-tyrosine ligase family
    cl25742
    Location:387 → 489
    ERM; Ezrin/radixin/moesin family

  2. XM_023340369.1 → XP_023196137.1  tubulin polyglutamylase TTLL6 isoform X2

    UniProtKB/TrEMBL
    A0A3B5R5D0
    Conserved Domains (2) summary
    pfam03133
    Location:4 → 279
    TTL; Tubulin-tyrosine ligase family
    cl25742
    Location:289 → 391
    ERM; Ezrin/radixin/moesin family
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.