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ptprz1 protein tyrosine phosphatase receptor type Z1 [ Pundamilia nyererei ]

Gene ID: 102202942, updated on 31-Jan-2024

Summary

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Gene symbol
ptprz1
Gene description
protein tyrosine phosphatase receptor type Z1
Gene type
protein coding
RefSeq status
MODEL
Organism
Pundamilia nyererei
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids; Pseudocrenilabrinae; Haplochromini; Pundamilia
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Genomic context

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Location:
chromosome: Un
Exon count:
14
Annotation release Status Assembly Chr Location
101 current PunNye1.0 (GCF_000239375.1) Unplaced Scaffold NW_005187679.1 (180764..249207)

NW_005187679.1Genomic Context describing neighboring genes Neighboring gene homeobox protein DBX1-B-like Neighboring gene dynein axonemal assembly factor 4 Neighboring gene receptor-type tyrosine-protein phosphatase zeta-like Neighboring gene aminoadipate-semialdehyde synthase

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005187679.1 Unplaced Scaffold Reference PunNye1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables carbonate dehydratase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
receptor-type tyrosine-protein phosphatase zeta

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pundamilia nyererei Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PunNye1.0

Genomic

  1. NW_005187679.1 Reference PunNye1.0

    Range
    180764..249207
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013915258.1 → XP_013770712.1  receptor-type tyrosine-protein phosphatase zeta

    UniProtKB/TrEMBL
    A0A9Y6MAU9
    Conserved Domains (2) summary
    pfam00041
    Location:275 → 362
    fn3; Fibronectin type III domain
    cl00012
    Location:45 → 259
    alpha_CA; Carbonic anhydrase alpha (vertebrate-like) group. Carbonic anhydrases (CAs) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism: a nucleophilic attack of a zinc-bound hydroxide ion on carbon ...
Nucleotide Protein
Heading Accession and Version

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