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ddr2a discoidin domain receptor tyrosine kinase 2a [ Pundamilia nyererei ]

Gene ID: 102198711, updated on 11-Apr-2024

Summary

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Gene symbol
ddr2a
Gene description
discoidin domain receptor tyrosine kinase 2a
See related
Ensembl:ENSPNYG00000019333
Gene type
protein coding
RefSeq status
MODEL
Organism
Pundamilia nyererei
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids; Pseudocrenilabrinae; Haplochromini; Pundamilia
Also known as
ddr2
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
17
Annotation release Status Assembly Chr Location
101 current PunNye1.0 (GCF_000239375.1) Unplaced Scaffold NW_005187457.1 (146184..177847, complement)

NW_005187457.1Genomic Context describing neighboring genes Neighboring gene SERPINE1 mRNA binding protein 1a Neighboring gene hydroxysteroid (17-beta) dehydrogenase 7 Neighboring gene UDP-N-acetylglucosamine pyrophosphorylase 1 Neighboring gene UBX domain protein 6

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005187457.1 Unplaced Scaffold Reference PunNye1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables collagen binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein tyrosine kinase collagen receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell surface receptor protein tyrosine kinase signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in multicellular organism development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of receptor complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
discoidin domain-containing receptor 2
Names
discoidin domain receptor tyrosine kinase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pundamilia nyererei Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PunNye1.0

Genomic

  1. NW_005187457.1 Reference PunNye1.0

    Range
    146184..177847 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013911106.1 → XP_013766560.1  discoidin domain-containing receptor 2 isoform X3

    UniProtKB/TrEMBL
    A0A3B4GWK5, A0A9Y6M6D9
    Conserved Domains (4) summary
    smart00221
    Location:546 → 834
    STYKc; Protein kinase; unclassified specificity
    smart00231
    Location:30 → 185
    FA58C; Coagulation factor 5/8 C-terminal domain, discoidin domain
    cd00057
    Location:32 → 184
    FA58C; Coagulation factor 5/8 C-terminal domain, discoidin domain; Cell surface-attached carbohydrate-binding domain, present in eukaryotes and assumed to have horizontally transferred to eubacterial genomes.
    cl21453
    Location:540 → 836
    PKc_like; Protein Kinases, catalytic domain

  2. XM_013911104.1 → XP_013766558.1  discoidin domain-containing receptor 2 isoform X1

    UniProtKB/TrEMBL
    A0A3B4GWK5, A0A9Y6M4P2
    Conserved Domains (4) summary
    smart00221
    Location:566 → 854
    STYKc; Protein kinase; unclassified specificity
    smart00231
    Location:30 → 185
    FA58C; Coagulation factor 5/8 C-terminal domain, discoidin domain
    cd00057
    Location:32 → 184
    FA58C; Coagulation factor 5/8 C-terminal domain, discoidin domain; Cell surface-attached carbohydrate-binding domain, present in eukaryotes and assumed to have horizontally transferred to eubacterial genomes.
    cl21453
    Location:560 → 856
    PKc_like; Protein Kinases, catalytic domain

  3. XM_013911105.1 → XP_013766559.1  discoidin domain-containing receptor 2 isoform X2

    UniProtKB/TrEMBL
    A0A3B4GWK5, A0A9Y6M952
    Related
    ENSPNYP00000025646.1, ENSPNYT00000026276.1
    Conserved Domains (4) summary
    smart00221
    Location:557 → 845
    STYKc; Protein kinase; unclassified specificity
    smart00231
    Location:30 → 185
    FA58C; Coagulation factor 5/8 C-terminal domain, discoidin domain
    cd00057
    Location:32 → 184
    FA58C; Coagulation factor 5/8 C-terminal domain, discoidin domain; Cell surface-attached carbohydrate-binding domain, present in eukaryotes and assumed to have horizontally transferred to eubacterial genomes.
    cl21453
    Location:551 → 847
    PKc_like; Protein Kinases, catalytic domain
Nucleotide Protein
Heading Accession and Version

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