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gcat glycine C-acetyltransferase [ Pundamilia nyererei ]

Gene ID: 102197971, updated on 10-Mar-2024

Summary

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Gene symbol
gcat
Gene description
glycine C-acetyltransferase
See related
Ensembl:ENSPNYG00000021324
Gene type
protein coding
RefSeq status
MODEL
Organism
Pundamilia nyererei
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids; Pseudocrenilabrinae; Haplochromini; Pundamilia
Orthologs
human zebrafish all
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Genomic context

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See gcat in Genome Data Viewer
Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
101 current PunNye1.0 (GCF_000239375.1) Unplaced Scaffold NW_005187482.1 (1225096..1229424)

NW_005187482.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC102193574 Neighboring gene target of myb1 membrane trafficking protein Neighboring gene minichromosome maintenance complex component 5 Neighboring gene heme oxygenase 1a

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005187482.1 Unplaced Scaffold Reference PunNye1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables pyridoxal phosphate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
2-amino-3-ketobutyrate coenzyme A ligase, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pundamilia nyererei Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PunNye1.0

Genomic

  1. NW_005187482.1 Reference PunNye1.0

    Range
    1225096..1229424
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005738117.1 → XP_005738174.1  2-amino-3-ketobutyrate coenzyme A ligase, mitochondrial

    UniProtKB/TrEMBL
    A0A3B4H4J4, A0A9Y3VP04
    Related
    ENSPNYP00000028336.1, ENSPNYT00000029027.1
    Conserved Domains (2) summary
    COG0156
    Location:37 → 357
    BioF; 7-keto-8-aminopelargonate synthetase or related enzyme [Coenzyme transport and metabolism]
    cl18945
    Location:37 → 367
    AAT_I; Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the ...
Nucleotide Protein
Heading Accession and Version

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