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ngef neuronal guanine nucleotide exchange factor [ Pundamilia nyererei ]

Gene ID: 102193147, updated on 10-Mar-2024

Summary

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Gene symbol
ngef
Gene description
neuronal guanine nucleotide exchange factor
See related
Ensembl:ENSPNYG00000019953
Gene type
protein coding
RefSeq status
MODEL
Organism
Pundamilia nyererei
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids; Pseudocrenilabrinae; Haplochromini; Pundamilia
Orthologs
human zebrafish all
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Genomic context

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See ngef in Genome Data Viewer
Location:
chromosome: Un
Exon count:
15
Annotation release Status Assembly Chr Location
101 current PunNye1.0 (GCF_000239375.1) Unplaced Scaffold NW_005187644.1 (468389..508148, complement)

NW_005187644.1Genomic Context describing neighboring genes Neighboring gene NLR family member X1-like Neighboring gene nemo-like kinase, type 2 Neighboring gene mitochondrial ribosomal protein S23 Neighboring gene gap junction delta-2 protein-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005187644.1 Unplaced Scaffold Reference PunNye1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables guanyl-nucleotide exchange factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in activation of GTPase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ephexin-1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pundamilia nyererei Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PunNye1.0

Genomic

  1. NW_005187644.1 Reference PunNye1.0

    Range
    468389..508148 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005749368.1 → XP_005749425.1  ephexin-1

    UniProtKB/TrEMBL
    A0A3B4GYZ1, A0A9Y3RY01
    Related
    ENSPNYP00000026481.1, ENSPNYT00000027127.1
    Conserved Domains (3) summary
    cd01221
    Location:359 → 483
    PH_ephexin; Ephexin Pleckstrin homology (PH) domain
    pfam00621
    Location:159 → 338
    RhoGEF; RhoGEF domain
    cl17036
    Location:497 → 551
    SH3; Src Homology 3 domain superfamily
Nucleotide Protein
Heading Accession and Version

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