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SALL1 spalt like transcription factor 1 [ Capra hircus (goat) ]

Gene ID: 102186713, updated on 10-Mar-2024

Summary

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Gene symbol
SALL1
Gene description
spalt like transcription factor 1
See related
EnsemblRapid:ENSCHIG00000026074
Gene type
protein coding
RefSeq status
MODEL
Organism
Capra hircus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Caprinae; Capra
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 18
Exon count:
5
Annotation release Status Assembly Chr Location
102 current ASM170441v1 (GCF_001704415.1) 18 NC_030825.1 (17763541..17779150)
101 previous assembly CHIR_1.0 (GCF_000317765.1) 18 NC_022310.1 (18989425..18995728, complement)

Chromosome 18 - NC_030825.1Genomic Context describing neighboring genes Neighboring gene transfer RNA cysteine (anticodon GCA) Neighboring gene uncharacterized LOC106503092 Neighboring gene protein ABHD18 pseudogene Neighboring gene CYLD lysine 63 deubiquitinase

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
sal-like protein 1
Names
sal-like 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Capra hircus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM170441v1 Primary Assembly

Genomic

  1. NC_030825.1 Reference ASM170441v1 Primary Assembly

    Range
    17763541..17779150
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018061932.1 → XP_017917421.1  sal-like protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A452G5M3, A0A8C2XW90
    Related
    ENSCHIP00000031883.1, ENSCHIT00000039758.2

  2. XM_018061933.1 → XP_017917422.1  sal-like protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A452G5Q0, A0A8C2XW45
    Related
    ENSCHIP00000031884.1, ENSCHIT00000039759.2
Nucleotide Protein
Heading Accession and Version

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