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EDF1 endothelial differentiation related factor 1 [ Capra hircus (goat) ]

Gene ID: 102184816, updated on 10-Mar-2024

Summary

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Gene symbol
EDF1
Gene description
endothelial differentiation related factor 1
See related
EnsemblRapid:ENSCHIG00000000124
Gene type
protein coding
RefSeq status
MODEL
Organism
Capra hircus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Caprinae; Capra
Orthologs
human mouse all
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Genomic context

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See EDF1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
102 current ASM170441v1 (GCF_001704415.1) Unplaced Scaffold NW_017189579.1 (37168..40719)
101 previous assembly CHIR_1.0 (GCF_000317765.1) 11 NC_022303.1 (103879888..103881525)

NW_017189579.1Genomic Context describing neighboring genes Neighboring gene F-box and WD repeat domain containing 5 Neighboring gene TNF receptor associated factor 2 Neighboring gene basic proline-rich protein-like Neighboring gene MAM domain containing 4 Neighboring gene phosphohistidine phosphatase 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
endothelial differentiation-related factor 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Capra hircus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM170441v1 Primary Assembly

Genomic

  1. NW_017189579.1 Reference ASM170441v1 Primary Assembly

    Range
    37168..40719
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018044501.1 → XP_017899990.1  endothelial differentiation-related factor 1

    UniProtKB/TrEMBL
    A0A452DK06
    Related
    ENSCHIP00000000156.1, ENSCHIT00000000180.1
    Conserved Domains (2) summary
    cl26727
    Location:48 → 142
    aMBF1; Archaeal ribosome-binding protein aMBF1, putative translation factor, contains Zn-ribbon and HTH domains [Translation, ribosomal structure and biogenesis]
    pfam08523
    Location:5 → 71
    MBF1; Multiprotein bridging factor 1
Nucleotide Protein
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