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ATP6V1C2 ATPase H+ transporting V1 subunit C2 [ Capra hircus (goat) ]

Gene ID: 102182700, updated on 1-Aug-2024

Summary

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Gene symbol
ATP6V1C2
Gene description
ATPase H+ transporting V1 subunit C2
See related
EnsemblRapid:ENSCHIG00000017272
Gene type
protein coding
RefSeq status
MODEL
Organism
Capra hircus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Caprinae; Capra
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 11
Exon count:
16
Annotation release Status Assembly Chr Location
102 current ASM170441v1 (GCF_001704415.1) 11 NC_030818.1 (86482675..86543318, complement)
101 previous assembly CHIR_1.0 (GCF_000317765.1) 11 NC_022303.1 (85653045..85712941, complement)

Chromosome 11 - NC_030818.1Genomic Context describing neighboring genes Neighboring gene transfer RNA cysteine (anticodon GCA) Neighboring gene uncharacterized LOC108637160 Neighboring gene protein disulfide isomerase family A member 6 Neighboring gene nucleolar protein 10 Neighboring gene ornithine decarboxylase 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables proton-transporting ATPase activity, rotational mechanism IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in proton transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in lysosomal membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of vacuolar proton-transporting V-type ATPase, V1 domain IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
V-type proton ATPase subunit C 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Capra hircus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM170441v1 Primary Assembly

Genomic

  1. NC_030818.1 Reference ASM170441v1 Primary Assembly

    Range
    86482675..86543318 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018055658.1 → XP_017911147.1  V-type proton ATPase subunit C 2 isoform X1

    UniProtKB/TrEMBL
    A0A452EZQ7, A0A8C2SDC2
    Related
    ENSCHIP00000052204.1, ENSCHIT00000049821.1

  2. XM_005687004.3 → XP_005687061.1  V-type proton ATPase subunit C 2 isoform X1

    See identical proteins and their annotated locations for XP_005687061.1

    UniProtKB/TrEMBL
    A0A452EZQ7, A0A8C2SDC2
    Conserved Domains (2) summary
    cd14785
    Location:55 → 75
    V-ATPase_C; 3-helical coiled coil [structural motif]
    pfam03223
    Location:5 → 417
    V-ATPase_C; V-ATPase subunit C

  3. XM_005687003.3 → XP_005687060.1  V-type proton ATPase subunit C 2 isoform X1

    See identical proteins and their annotated locations for XP_005687060.1

    UniProtKB/TrEMBL
    A0A452EZQ7, A0A8C2SDC2
    Conserved Domains (2) summary
    cd14785
    Location:55 → 75
    V-ATPase_C; 3-helical coiled coil [structural motif]
    pfam03223
    Location:5 → 417
    V-ATPase_C; V-ATPase subunit C

  4. XM_018055657.1 → XP_017911146.1  V-type proton ATPase subunit C 2 isoform X2

    UniProtKB/TrEMBL
    A0A8C2SH47, A0AAJ7NXX1

  5. XM_018055655.1 → XP_017911144.1  V-type proton ATPase subunit C 2 isoform X1

    UniProtKB/TrEMBL
    A0A452EZQ7, A0A8C2SDC2
    Related
    ENSCHIP00000036448.1, ENSCHIT00000055531.1

  6. XM_018055656.1 → XP_017911145.1  V-type proton ATPase subunit C 2 isoform X1

    UniProtKB/TrEMBL
    A0A452EZQ7, A0A8C2SDC2

RNA

  1. XR_001918846.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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