U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

ARNT2 aryl hydrocarbon receptor nuclear translocator 2 [ Capra hircus (goat) ]

Gene ID: 102174701, updated on 1-Aug-2024

Summary

Go to the top of the page Help
Gene symbol
ARNT2
Gene description
aryl hydrocarbon receptor nuclear translocator 2
See related
EnsemblRapid:ENSCHIG00000022641
Gene type
protein coding
RefSeq status
MODEL
Organism
Capra hircus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Caprinae; Capra
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 21
Exon count:
21
Annotation release Status Assembly Chr Location
102 current ASM170441v1 (GCF_001704415.1) 21 NC_030828.1 (25892111..26082636)
101 previous assembly CHIR_1.0 (GCF_000317765.1) 21 NC_022313.1 (24127704..24329051)

Chromosome 21 - NC_030828.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC108638543 Neighboring gene fumarylacetoacetate hydrolase Neighboring gene transfer RNA glycine (anticodon CCC) Neighboring gene abhydrolase domain containing 17C, depalmitoylase Neighboring gene cell migration inducing hyaluronidase 1

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein dimerization activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of aryl hydrocarbon receptor complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of transcription regulator complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
aryl hydrocarbon receptor nuclear translocator 2

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Capra hircus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM170441v1 Primary Assembly

Genomic

  1. NC_030828.1 Reference ASM170441v1 Primary Assembly

    Range
    25892111..26082636
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018066310.1 → XP_017921799.1  aryl hydrocarbon receptor nuclear translocator 2 isoform X3

    UniProtKB/TrEMBL
    A0A8C2RNB4, A0AAJ7P8I6
    Conserved Domains (3) summary
    cd18947
    Location:62 → 124
    bHLH-PAS_ARNT; basic helix-loop-helix-Per-ARNT-Sim (bHLH-PAS) domain found in aryl hydrocarbon receptor nuclear translocator (ARNT) and similar proteins
    pfam00989
    Location:137 → 243
    PAS; PAS fold
    pfam14598
    Location:336 → 436
    PAS_11; PAS domain

  2. XM_018066308.1 → XP_017921797.1  aryl hydrocarbon receptor nuclear translocator 2 isoform X1

    UniProtKB/TrEMBL
    A0A452FPP0, A0A8C2RNB4
    Conserved Domains (3) summary
    cd18947
    Location:62 → 124
    bHLH-PAS_ARNT; basic helix-loop-helix-Per-ARNT-Sim (bHLH-PAS) domain found in aryl hydrocarbon receptor nuclear translocator (ARNT) and similar proteins
    pfam00989
    Location:137 → 243
    PAS; PAS fold
    pfam14598
    Location:336 → 436
    PAS_11; PAS domain

  3. XM_018066309.1 → XP_017921798.1  aryl hydrocarbon receptor nuclear translocator 2 isoform X2

    UniProtKB/TrEMBL
    A0A8C2RNB4, A0AAJ7P7Y0
    Conserved Domains (3) summary
    cd18947
    Location:62 → 124
    bHLH-PAS_ARNT; basic helix-loop-helix-Per-ARNT-Sim (bHLH-PAS) domain found in aryl hydrocarbon receptor nuclear translocator (ARNT) and similar proteins
    pfam00989
    Location:137 → 243
    PAS; PAS fold
    pfam14598
    Location:336 → 436
    PAS_11; PAS domain

  4. XM_013973038.2 → XP_013828492.1  aryl hydrocarbon receptor nuclear translocator 2 isoform X4

    UniProtKB/TrEMBL
    A0A452FPH7, A0A8C2RNB4
    Conserved Domains (5) summary
    smart00091
    Location:129 → 188
    PAS; PAS domain
    cd00130
    Location:325 → 421
    PAS; PAS domain; PAS motifs appear in archaea, eubacteria and eukarya. Probably the most surprising identification of a PAS domain was that in EAG-like K+-channels. PAS domains have been found to bind ligands, and to act as sensors for light and oxygen in ...
    pfam00010
    Location:54 → 106
    HLH; Helix-loop-helix DNA-binding domain
    pfam00989
    Location:126 → 232
    PAS; PAS fold
    pfam14598
    Location:325 → 425
    PAS_11; PAS domain

  5. XM_005695068.3 → XP_005695125.1  aryl hydrocarbon receptor nuclear translocator 2 isoform X4

    See identical proteins and their annotated locations for XP_005695125.1

    UniProtKB/TrEMBL
    A0A452FPH7, A0A8C2RNB4
    Related
    ENSCHIP00000026227.2, ENSCHIT00000034090.2
    Conserved Domains (5) summary
    smart00091
    Location:129 → 188
    PAS; PAS domain
    cd00130
    Location:325 → 421
    PAS; PAS domain; PAS motifs appear in archaea, eubacteria and eukarya. Probably the most surprising identification of a PAS domain was that in EAG-like K+-channels. PAS domains have been found to bind ligands, and to act as sensors for light and oxygen in ...
    pfam00010
    Location:54 → 106
    HLH; Helix-loop-helix DNA-binding domain
    pfam00989
    Location:126 → 232
    PAS; PAS fold
    pfam14598
    Location:325 → 425
    PAS_11; PAS domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.