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ARB2A ARB2 cotranscriptional regulator A [ Equus caballus (horse) ]

Gene ID: 102148790, updated on 17-Aug-2024

Summary

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Official Symbol
ARB2Aprovided by VGNC
Official Full Name
ARB2 cotranscriptional regulator Aprovided by VGNC
Primary source
VGNC:VGNC:17826
See related
Ensembl:ENSECAG00000018274
Gene type
protein coding
RefSeq status
MODEL
Organism
Equus caballus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
Also known as
FAM172A
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 14
Exon count:
16
Annotation release Status Assembly Chr Location
RS_2024_08 current EquCab3.0 (GCF_002863925.1) 14 NC_009157.3 (74349244..74731926)

Chromosome 14 - NC_009157.3Genomic Context describing neighboring genes Neighboring gene SMC5-SMC6 complex localization factor 1 Neighboring gene KIAA0825 Neighboring gene POU domain class 5, transcription factor 2 Neighboring gene uncharacterized LOC111767888 Neighboring gene uncharacterized LOC102148923 Neighboring gene nuclear receptor subfamily 2 group F member 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_009157.3 Chromosome 14 Reference EquCab3.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Annotation of the Protein Coding Regions of the Equine Genome. Hestand MS, et al. PLoS One, 2015. PMID 26107351, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables siRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulatory ncRNA-mediated heterochromatin formation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cotranscriptional regulator ARB2A
Names
family with sequence similarity 172 member A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_002863925.1-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EquCab3.0 Primary Assembly

Genomic

  1. NC_009157.3 Reference EquCab3.0 Primary Assembly

    Range
    74349244..74731926
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023618009.1 → XP_023473777.1  cotranscriptional regulator ARB2A isoform X5

  2. XM_023618014.1 → XP_023473782.1  cotranscriptional regulator ARB2A isoform X8

  3. XM_023618015.1 → XP_023473783.1  cotranscriptional regulator ARB2A isoform X9

  4. XM_023618006.1 → XP_023473774.1  cotranscriptional regulator ARB2A isoform X1

    UniProtKB/TrEMBL
    K9KD23

  5. XM_023618008.1 → XP_023473776.1  cotranscriptional regulator ARB2A isoform X3

    UniProtKB/TrEMBL
    K9KD23

  6. XM_023618007.1 → XP_023473775.1  cotranscriptional regulator ARB2A isoform X2

    UniProtKB/TrEMBL
    A0A3Q2IDV1, K9KD23
    Related
    ENSECAP00000046421.2, ENSECAT00000042259.2

  7. XM_014730769.2 → XP_014586255.1  cotranscriptional regulator ARB2A isoform X4

    UniProtKB/TrEMBL
    K9KD23
    Related
    ENSECAP00000030470.3, ENSECAT00000064034.3

  8. XM_023618011.1 → XP_023473779.1  cotranscriptional regulator ARB2A isoform X6

    UniProtKB/TrEMBL
    K9KD23

  9. XM_023618016.1 → XP_023473784.1  cotranscriptional regulator ARB2A isoform X10

    UniProtKB/TrEMBL
    A0A3Q2I5X5, F7CUH0
    Related
    ENSECAP00000015929.4, ENSECAT00000019460.4

  10. XM_023618012.1 → XP_023473780.1  cotranscriptional regulator ARB2A isoform X7

    UniProtKB/TrEMBL
    A0A3Q2HBM0, A0A3Q2L4B2
    Related
    ENSECAP00000031022.2, ENSECAT00000038874.2

  11. XM_023618013.1 → XP_023473781.1  cotranscriptional regulator ARB2A isoform X7

    UniProtKB/TrEMBL
    A0A3Q2HBM0, A0A3Q2L4B2
Nucleotide Protein
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