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VAMP1 vesicle associated membrane protein 1 [ Macaca fascicularis (crab-eating macaque) ]

Gene ID: 102138474, updated on 1-Aug-2024

Summary

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Gene symbol
VAMP1
Gene description
vesicle associated membrane protein 1
See related
Ensembl:ENSMFAG00000035441
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca fascicularis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 11
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2024_05 current T2T-MFA8v1.0 (GCF_037993035.1) 11 NC_088385.1 (7363642..7397117, complement)
102 previous assembly MFA1912RKSv2 (GCF_012559485.2) 11 NC_052265.1 (6640740..6650032, complement)

Chromosome 11 - NC_088385.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC123567442 Neighboring gene sodium channel epithelial 1 subunit alpha Neighboring gene uncharacterized LOC135966143 Neighboring gene lymphotoxin beta receptor Neighboring gene CD27 molecule Neighboring gene TAP binding protein like Neighboring gene plakophilin-2-like Neighboring gene mitochondrial ribosomal protein L51

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Rate of evolution in brain-expressed genes in humans and other primates. Wang HY, et al. PLoS Biol, 2007 Feb. PMID 17194215, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables SNAP receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables syntaxin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in SNARE complex assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in vesicle fusion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of SNARE complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
vesicle-associated membrane protein 1
Names
vesicle-associated membrane protein 1 (synaptobrevin 1)

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_037993035.1-RS_2024_05

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference T2T-MFA8v1.0

Genomic

  1. NC_088385.1 Reference T2T-MFA8v1.0

    Range
    7363642..7397117 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_065523638.1 → XP_065379710.1  vesicle-associated membrane protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A2K5U1W9

  2. XM_005569903.4 → XP_005569960.1  vesicle-associated membrane protein 1 isoform X2

    See identical proteins and their annotated locations for XP_005569960.1

    UniProtKB/TrEMBL
    A0A7N9IGI9, G7PJM9
    Related
    ENSMFAP00000006284.1
    Conserved Domains (1) summary
    cd15870
    Location:32 → 94
    R-SNARE_VAMP2; SNARE motif of VAMP2
Nucleotide Protein
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