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COL6A2 collagen type VI alpha 2 chain [ Macaca fascicularis (crab-eating macaque) ]

Gene ID: 102137961, updated on 1-Aug-2024

Summary

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Gene symbol
COL6A2
Gene description
collagen type VI alpha 2 chain
See related
Ensembl:ENSMFAG00000031451
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca fascicularis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See COL6A2 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
29
Annotation release Status Assembly Chr Location
RS_2024_05 current T2T-MFA8v1.0 (GCF_037993035.1) 3 NC_088377.1 (981934..1017554, complement)
102 previous assembly MFA1912RKSv2 (GCF_012559485.2) 3 NC_052257.1 (161943631..161979132)

Chromosome 3 - NC_088377.1Genomic Context describing neighboring genes Neighboring gene lanosterol synthase Neighboring gene uncharacterized LOC107129053 Neighboring gene spermatogenesis and centriole associated 1 like Neighboring gene formimidoyltransferase cyclodeaminase Neighboring gene collagen type VI alpha 1 chain Neighboring gene basic proline-rich protein-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in collagen-containing extracellular matrix IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
collagen alpha-2(VI) chain
Names
collagen, type VI, alpha 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_037993035.1-RS_2024_05

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference T2T-MFA8v1.0

Genomic

  1. NC_088377.1 Reference T2T-MFA8v1.0

    Range
    981934..1017554 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005548495.4 → XP_005548552.3  collagen alpha-2(VI) chain isoform X1

  2. XM_005548496.4 → XP_005548553.3  collagen alpha-2(VI) chain isoform X2

    UniProtKB/TrEMBL
    G7P042
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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