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VPS35 VPS35 retromer complex component [ Pseudopodoces humilis (Tibetan ground-tit) ]

Gene ID: 102112628, updated on 3-Aug-2024

Summary

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Gene symbol
VPS35
Gene description
VPS35 retromer complex component
Gene type
protein coding
RefSeq status
MODEL
Organism
Pseudopodoces humilis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Paridae; Pseudopodoces
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
17
Annotation release Status Assembly Chr Location
101 current PseHum1.0 (GCF_000331425.1) Unplaced Scaffold NW_005087583.1 (7215480..7239719)

NW_005087583.1Genomic Context describing neighboring genes Neighboring gene myosin light chain kinase 3 Neighboring gene origin recognition complex subunit 6 Neighboring gene histamine H3 receptor-like Neighboring gene SHC binding and spindle associated 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005087583.1 Unplaced Scaffold Reference PseHum1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in intracellular protein transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in retrograde transport, endosome to Golgi IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in late endosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of retromer complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of retromer, cargo-selective complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
vacuolar protein sorting-associated protein 35
Names
vacuolar protein sorting 35 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pseudopodoces humilis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PseHum1.0 Primary Assembly

Genomic

  1. NW_005087583.1 Reference PseHum1.0 Primary Assembly

    Range
    7215480..7239719
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005526387.2 → XP_005526444.1  vacuolar protein sorting-associated protein 35

    Conserved Domains (1) summary
    pfam03635
    Location:15 → 752
    Vps35; Vacuolar protein sorting-associated protein 35
Nucleotide Protein
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