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SMCR8 SMCR8-C9orf72 complex subunit [ Columba livia (rock pigeon) ]

Gene ID: 102094907, updated on 3-Aug-2024

Summary

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Gene symbol
SMCR8
Gene description
SMCR8-C9orf72 complex subunit
Gene type
protein coding
RefSeq status
MODEL
Organism
Columba livia
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Columbimorphae; Columbiformes; Columbidae; Columba
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 15
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_05 current bColLiv1.pat.W.v2 (GCF_036013475.1) 15 NC_088616.1 (12804882..12813669, complement)
102 previous assembly Cliv_1.0 (GCF_000337935.1) Unplaced Scaffold NW_004973324.1 (1126427..1135013, complement)

Chromosome 15 - NC_088616.1Genomic Context describing neighboring genes Neighboring gene phosphoribosyl pyrophosphate synthetase associated protein 2 Neighboring gene chemerin-like receptor 1 Neighboring gene serine hydroxymethyltransferase 1 Neighboring gene DNA topoisomerase III alpha Neighboring gene mitochondrial elongation factor 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genomic diversity and evolution of the head crest in the rock pigeon. Shapiro MD, et al. Science, 2013 Mar 1. PMID 23371554, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTPase activator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of guanyl-nucleotide exchange factor complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
guanine nucleotide exchange protein SMCR8
Names
Smith-Magenis syndrome chromosomal region candidate gene 8 protein
Smith-Magenis syndrome chromosome region, candidate 8

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_036013475.1-RS_2024_05

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bColLiv1.pat.W.v2

Genomic

  1. NC_088616.1 Reference bColLiv1.pat.W.v2

    Range
    12804882..12813669 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005504546.4 → XP_005504603.2  guanine nucleotide exchange protein SMCR8

    UniProtKB/TrEMBL
    A0A2I0LTH6
Nucleotide Protein
Heading Accession and Version

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