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SH3YL1 SH3 and SYLF domain containing 1 [ Columba livia (rock pigeon) ]

Gene ID: 102094669, updated on 3-Aug-2024

Summary

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Gene symbol
SH3YL1
Gene description
SH3 and SYLF domain containing 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Columba livia
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Columbimorphae; Columbiformes; Columbidae; Columba
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 3
Exon count:
13
Annotation release Status Assembly Chr Location
RS_2024_05 current bColLiv1.pat.W.v2 (GCF_036013475.1) 3 NC_088604.1 (21412321..21494542)
102 previous assembly Cliv_1.0 (GCF_000337935.1) Unplaced Scaffold NW_004973413.1 (15310928..15345055, complement)

Chromosome 3 - NC_088604.1Genomic Context describing neighboring genes Neighboring gene syntrophin gamma 2 Neighboring gene transmembrane protein 18 Neighboring gene ALK and LTK ligand 2 Neighboring gene acid phosphatase 1 Neighboring gene family with sequence similarity 110 member C Neighboring gene F-box protein 25

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphatidylinositol binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of ruffle assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in ruffle membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
SH3 domain-containing YSC84-like protein 1
Names
SH3 domain containing, Ysc84-like 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_036013475.1-RS_2024_05

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bColLiv1.pat.W.v2

Genomic

  1. NC_088604.1 Reference bColLiv1.pat.W.v2

    Range
    21412321..21494542
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_065056007.1 → XP_064912079.1  SH3 domain-containing YSC84-like protein 1 isoform X4

    UniProtKB/TrEMBL
    A0A2I0MUW2

  2. XM_065056004.1 → XP_064912076.1  SH3 domain-containing YSC84-like protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A2I0MUW2

  3. XM_065056005.1 → XP_064912077.1  SH3 domain-containing YSC84-like protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A2I0MUW2

  4. XM_065056006.1 → XP_064912078.1  SH3 domain-containing YSC84-like protein 1 isoform X3

  5. XM_065056008.1 → XP_064912080.1  SH3 domain-containing YSC84-like protein 1 isoform X5

RNA

  1. XR_010471143.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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