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P3H1 prolyl 3-hydroxylase 1 [ Columba livia (rock pigeon) ]

Gene ID: 102094017, updated on 3-Aug-2024

Summary

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Gene symbol
P3H1
Gene description
prolyl 3-hydroxylase 1
Locus tag
A306_15208
Gene type
protein coding
RefSeq status
MODEL
Organism
Columba livia
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Columbimorphae; Columbiformes; Columbidae; Columba
Also known as
LEPRE1
Orthologs
human mouse all
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Genomic context

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See P3H1 in Genome Data Viewer
Location:
chromosome: 21
Exon count:
15
Annotation release Status Assembly Chr Location
RS_2024_05 current bColLiv1.pat.W.v2 (GCF_036013475.1) 21 NC_088622.1 (6527034..6535242, complement)
102 previous assembly Cliv_1.0 (GCF_000337935.1) Unplaced Scaffold NW_004974107.1 (21101..27850)

Chromosome 21 - NC_088622.1Genomic Context describing neighboring genes Neighboring gene claudin-16 Neighboring gene claudin 19 Neighboring gene chromosome 21 C1orf50 homolog Neighboring gene uncharacterized LOC110366141

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables L-ascorbic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables iron ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables procollagen-proline 3-dioxygenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in collagen metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
prolyl 3-hydroxylase 1
Names
leucine proline-enriched proteoglycan (leprecan) 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_036013475.1-RS_2024_05

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bColLiv1.pat.W.v2

Genomic

  1. NC_088622.1 Reference bColLiv1.pat.W.v2

    Range
    6527034..6535242 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_065038174.1 → XP_064894246.1  prolyl 3-hydroxylase 1

Nucleotide Protein
Heading Accession and Version

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