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GRAMD4 GRAM domain containing 4 [ Columba livia (rock pigeon) ]

Gene ID: 102093112, updated on 10-Mar-2024

Summary

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Gene symbol
GRAMD4
Gene description
GRAM domain containing 4
Locus tag
A306_04872
Gene type
protein coding
RefSeq status
MODEL
Organism
Columba livia
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Columbiformes; Columbidae; Columba
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
18
Annotation release Status Assembly Chr Location
102 current Cliv_1.0 (GCF_000337935.1) Unplaced Scaffold NW_004973179.1 (3487439..3541725)

NW_004973179.1Genomic Context describing neighboring genes Neighboring gene cadherin EGF LAG seven-pass G-type receptor 1 Neighboring gene uncharacterized LOC110355522 Neighboring gene histone H2B 5 Neighboring gene uncharacterized LOC110355642 Neighboring gene uncharacterized LOC110355703 Neighboring gene uncharacterized LOC110355662

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004973179 Unplaced Scaffold Reference Cliv_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in apoptotic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of toll-like receptor 9 signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of cysteine-type endopeptidase activity involved in apoptotic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
GRAM domain-containing protein 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Columba livia Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Cliv_1.0 Primary Assembly

Genomic

  1. NW_004973179.1 Reference Cliv_1.0 Primary Assembly

    Range
    3487439..3541725
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005498112.3 → XP_005498169.1  GRAM domain-containing protein 4

    UniProtKB/TrEMBL
    A0A2I0MHJ4
    Conserved Domains (2) summary
    cd13221
    Location:461 → 566
    PH-GRAM_GRAMDC4; GRAM domain-containing protein 4 (GRAMDC4) Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase activators and Myotubularins (PH-GRAM) domain
    cl26472
    Location:76 → 225
    DUF3084; Protein of unknown function (DUF3084)
Nucleotide Protein
Heading Accession and Version

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