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KDSR 3-ketodihydrosphingosine reductase [ Columba livia (rock pigeon) ]

Gene ID: 102093036, updated on 3-Aug-2024

Summary

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Gene symbol
KDSR
Gene description
3-ketodihydrosphingosine reductase
Locus tag
A306_09665
Gene type
protein coding
RefSeq status
MODEL
Organism
Columba livia
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Columbimorphae; Columbiformes; Columbidae; Columba
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 2
Exon count:
10
Annotation release Status Assembly Chr Location
RS_2024_05 current bColLiv1.pat.W.v2 (GCF_036013475.1) 2 NC_088603.1 (75280089..75305333)
102 previous assembly Cliv_1.0 (GCF_000337935.1) Unplaced Scaffold NW_004973571.1 (473751..496993, complement)

Chromosome 2 - NC_088603.1Genomic Context describing neighboring genes Neighboring gene vacuolar protein sorting 4 homolog B Neighboring gene uncharacterized LOC110364147 Neighboring gene BCL2 apoptosis regulator Neighboring gene uncharacterized LOC110364145 Neighboring gene MARVEL domain-containing protein 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 3-dehydrosphinganine reductase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in 3-keto-sphinganine metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sphingolipid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
3-ketodihydrosphingosine reductase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_036013475.1-RS_2024_05

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bColLiv1.pat.W.v2

Genomic

  1. NC_088603.1 Reference bColLiv1.pat.W.v2

    Range
    75280089..75305333
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005509734.3 → XP_005509791.1  3-ketodihydrosphingosine reductase

    UniProtKB/TrEMBL
    A0A2I0MW12
    Conserved Domains (1) summary
    cd08939
    Location:32 → 268
    KDSR-like_SDR_c; 3-ketodihydrosphingosine reductase (KDSR) and related proteins, classical (c) SDR
Nucleotide Protein
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