U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

PLEKHF1 pleckstrin homology and FYVE domain containing 1 [ Zonotrichia albicollis (white-throated sparrow) ]

Gene ID: 102075303, updated on 3-Aug-2024

Summary

Go to the top of the page Help
Gene symbol
PLEKHF1
Gene description
pleckstrin homology and FYVE domain containing 1
See related
Ensembl:ENSZALG00000000880
Gene type
protein coding
RefSeq status
MODEL
Organism
Zonotrichia albicollis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passerellidae; Zonotrichia
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: Un
Exon count:
3
Annotation release Status Assembly Chr Location
102 current Zonotrichia_albicollis-1.0.1 (GCF_000385455.1) Unplaced Scaffold NW_005081628.1 (1764986..1772055, complement)

NW_005081628.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein F13E9.13, mitochondrial Neighboring gene chromosome unknown C19orf12 homolog Neighboring gene POP4 homolog, ribonuclease P/MRP subunit Neighboring gene V-set and transmembrane domain containing 2B

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_005081628 Unplaced Scaffold Reference Zonotrichia_albicollis-1.0.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phosphatidylinositol binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
pleckstrin homology domain-containing family F member 1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Zonotrichia albicollis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Zonotrichia_albicollis-1.0.1

Genomic

  1. NW_005081628.1 Reference Zonotrichia_albicollis-1.0.1

    Range
    1764986..1772055 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005490078.3 → XP_005490135.1  pleckstrin homology domain-containing family F member 1

    UniProtKB/TrEMBL
    A0A8D2M2H9
    Related
    ENSZALP00000000748.1, ENSZALT00000001326.1
    Conserved Domains (3) summary
    cd01218
    Location:7 → 129
    PH_Phafin2-like; Phafin2 (also called EAPF, FLJ13187, ZFYVE18 or PLEKHF2) Pleckstrin Homology (PH) domain
    cd15754
    Location:148 → 211
    FYVE_PKHF1; FYVE domain found in protein containing both PH and FYVE domains 1 (phafin-1) and similar proteins
    pfam00169
    Location:39 → 131
    PH; PH domain

  2. XM_014269187.2 → XP_014124662.1  pleckstrin homology domain-containing family F member 1

    UniProtKB/TrEMBL
    A0A8D2M2H9
    Conserved Domains (3) summary
    cd01218
    Location:7 → 129
    PH_Phafin2-like; Phafin2 (also called EAPF, FLJ13187, ZFYVE18 or PLEKHF2) Pleckstrin Homology (PH) domain
    cd15754
    Location:148 → 211
    FYVE_PKHF1; FYVE domain found in protein containing both PH and FYVE domains 1 (phafin-1) and similar proteins
    pfam00169
    Location:39 → 131
    PH; PH domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.