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PTCHD4 patched domain containing 4 [ Zonotrichia albicollis (white-throated sparrow) ]

Gene ID: 102074406, updated on 3-Aug-2024

Summary

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Gene symbol
PTCHD4
Gene description
patched domain containing 4
See related
Ensembl:ENSZALG00000000558
Gene type
protein coding
RefSeq status
MODEL
Organism
Zonotrichia albicollis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passerellidae; Zonotrichia
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
3
Annotation release Status Assembly Chr Location
102 current Zonotrichia_albicollis-1.0.1 (GCF_000385455.1) Unplaced Scaffold NW_005081561.1 (2929948..3019966, complement)

NW_005081561.1Genomic Context describing neighboring genes Neighboring gene adhesion G protein-coupled receptor F4 Neighboring gene opsin 5 Neighboring gene uncharacterized LOC113459047 Neighboring gene eva-1 homolog A, regulator of programmed cell death Neighboring gene transfer RNA cysteine (anticodon GCA)

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005081561 Unplaced Scaffold Reference Zonotrichia_albicollis-1.0.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
patched domain-containing protein 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Zonotrichia albicollis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Zonotrichia_albicollis-1.0.1

Genomic

  1. NW_005081561.1 Reference Zonotrichia_albicollis-1.0.1

    Range
    2929948..3019966 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026792181.1 → XP_026647982.1  patched domain-containing protein 4 isoform X2

    UniProtKB/TrEMBL
    A0A8D2Q9K6, D8KWH7
    Related
    ENSZALP00000000475.1, ENSZALT00000000800.1
    Conserved Domains (1) summary
    cl25655
    Location:148 → 812
    Patched; Patched family

  2. XM_005485087.3 → XP_005485144.1  patched domain-containing protein 4 isoform X1

    UniProtKB/TrEMBL
    D8KWH7
    Conserved Domains (2) summary
    pfam02460
    Location:114 → 870
    Patched; Patched family
    cl21543
    Location:315 → 466
    MMPL; MMPL family
Nucleotide Protein
Heading Accession and Version

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