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ZNF423 zinc finger protein 423 [ Zonotrichia albicollis (white-throated sparrow) ]

Gene ID: 102072720, updated on 3-Aug-2024

Summary

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Gene symbol
ZNF423
Gene description
zinc finger protein 423
See related
Ensembl:ENSZALG00000008407
Gene type
protein coding
RefSeq status
MODEL
Organism
Zonotrichia albicollis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passerellidae; Zonotrichia
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
13
Annotation release Status Assembly Chr Location
102 current Zonotrichia_albicollis-1.0.1 (GCF_000385455.1) Unplaced Scaffold NW_005081605.1 (514016..795570, complement)

NW_005081605.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC102072305 Neighboring gene uncharacterized LOC102072600 Neighboring gene CTD nuclear envelope phosphatase 1 regulatory subunit 1 Neighboring gene HEAT repeat containing 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005081605 Unplaced Scaffold Reference Zonotrichia_albicollis-1.0.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II transcription regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger protein 423

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Zonotrichia albicollis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Zonotrichia_albicollis-1.0.1

Genomic

  1. NW_005081605.1 Reference Zonotrichia_albicollis-1.0.1

    Range
    514016..795570 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014268347.2 → XP_014123822.1  zinc finger protein 423 isoform X2

    UniProtKB/TrEMBL
    A0A8D2MP31
    Related
    ENSZALP00000009867.1, ENSZALT00000013694.1
    Conserved Domains (2) summary
    COG5048
    Location:206 → 612
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:152 → 172
    ZF_C2H2; C2H2 Zn finger [structural motif]

  2. XM_014268344.2 → XP_014123819.1  zinc finger protein 423 isoform X1

    UniProtKB/TrEMBL
    A0A8D2MN86
    Related
    ENSZALP00000009866.1, ENSZALT00000013693.1
    Conserved Domains (2) summary
    COG5048
    Location:233 → 639
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:179 → 199
    ZF_C2H2; C2H2 Zn finger [structural motif]

  3. XM_014268348.2 → XP_014123823.1  zinc finger protein 423 isoform X3

    Conserved Domains (2) summary
    COG5048
    Location:161 → 567
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:107 → 127
    ZF_C2H2; C2H2 Zn finger [structural motif]

  4. XM_026794651.1 → XP_026650452.1  zinc finger protein 423 isoform X3

  5. XM_014268349.2 → XP_014123824.1  zinc finger protein 423 isoform X4

    UniProtKB/TrEMBL
    A0A8D2MQ08
    Related
    ENSZALP00000009868.1, ENSZALT00000013695.1
    Conserved Domains (2) summary
    COG5048
    Location:77 → 483
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:23 → 43
    ZF_C2H2; C2H2 Zn finger [structural motif]
Nucleotide Protein
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