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PHGDH phosphoglycerate dehydrogenase [ Zonotrichia albicollis (white-throated sparrow) ]

Gene ID: 102072433, updated on 3-Aug-2024

Summary

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Gene symbol
PHGDH
Gene description
phosphoglycerate dehydrogenase
See related
Ensembl:ENSZALG00000015518
Gene type
protein coding
RefSeq status
MODEL
Organism
Zonotrichia albicollis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passerellidae; Zonotrichia
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
102 current Zonotrichia_albicollis-1.0.1 (GCF_000385455.1) Unplaced Scaffold NW_005081730.1 (49309..52347)

NW_005081730.1Genomic Context describing neighboring genes Neighboring gene phosphodiesterase 4D interacting protein Neighboring gene uncharacterized LOC106629776 Neighboring gene 3-hydroxy-3-methylglutaryl-CoA synthase 2 Neighboring gene notch receptor 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005081730 Unplaced Scaffold Reference Zonotrichia_albicollis-1.0.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables NAD binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phosphoglycerate dehydrogenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in L-serine biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
D-3-phosphoglycerate dehydrogenase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Zonotrichia albicollis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Zonotrichia_albicollis-1.0.1

Genomic

  1. NW_005081730.1 Reference Zonotrichia_albicollis-1.0.1

    Range
    49309..52347
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014271725.2 → XP_014127200.1  D-3-phosphoglycerate dehydrogenase

    UniProtKB/TrEMBL
    A0A8D2NBL6
    Related
    ENSZALP00000019632.1, ENSZALT00000025780.1
    Conserved Domains (2) summary
    cd12173
    Location:8 → 310
    PGDH_4; Phosphoglycerate dehydrogenases, NAD-binding and catalytic domains
    TIGR01327
    Location:8 → 529
    PGDH; D-3-phosphoglycerate dehydrogenase
Nucleotide Protein
Heading Accession and Version

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